Panicum virgatum (switchgrass): 120704138
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Entry
120704138 CDS
T07260
Name
(RefSeq) cryptochrome DASH, chloroplastic/mitochondrial
KO
K25656
cryptochrome
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99998 Others
120704138
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
120704138
NCBI-ProteinID:
XP_039844350
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Position
4K:complement(42548608..42551882)
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AA seq
545 aa
AA seq
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MNAAASSSSSRPVRGAAVPVPSLSADETGAVADETFQRHTSPSLRRGGAGVAVVWFRNDL
RVLDNEALVRAWAASEAVLPVFCVDPRIFEGSTHYFGFPKTAALRAQFLVECVGDLKYNL
KKKGLDLLVRTGKPEEILPTIAKAVSAHTVYAQKETCSEELFVEGLVRKGLEQVQITQGG
TSGQKKSPNPRLQLIWGATMYHIDDLPFTVNNLPDVYTQFRKAVESKSSVRNCSKLPPSL
GPPPSYGLDEIGGWGAIPTLESLGLSVTKSEKGMHFKGGENAALGRVHEYFWKKDQLKVY
KETRNGMLGPDYSTKFSPWLASGSLSPRYICEEVKRYEKQRVANDSTYWVLFELIWRDYF
KFLSAKYGNSIFHLGGPRKVVSKWSQDQALFESWRDGRTGYPLIDANMMELSATGFMSNR
GRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPASNYGNWTYGAGVGNDPREDRYFSIPK
QAKTYDPEGEYVSYWLPELRSLAKERRNFPGASYIRQIVPLKFDGGNQKKDQQFNRQRRP
NMYRR
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgccgcctcaagctcttcgtcccggccggtgcgcggtgcggcggtgccggtg
ccttctctcagcgccgacgagaccggcgcggtggctgacgagaccttccagaggcatacg
tcgccgagcttgaggagaggcggggccggggtggctgtagtgtggttcaggaacgatctc
cgggtgctcgacaacgaggcgctggtgcgcgcgtgggcggcgtccgaggcggtcctgccg
gtgttctgcgttgatcctcggatcttcgaagggagcacgcactacttcgggttccccaag
actgcagcattgagggcacagttcttggtagagtgtgtgggagatctgaagtataatttg
aagaaaaagggtctcgatttactagttcgaaccggcaagcctgaagagatccttcctaca
attgcaaaggctgtcagtgcacatactgtttatgctcaaaaggaaacctgcagtgaggag
ctcttcgtcgagggcctcgtgcgcaaaggcctagagcaagttcagattactcaaggagga
acatctggccagaagaaatctccgaaccccaggctgcagctcatctggggagcaacaatg
taccatattgatgacctcccgttcactgtgaacaacttgccagacgtgtacacacagttc
agaaaggcggttgaatccaagtcctcggttaggaattgcagcaagttgccgccatcgctt
ggaccgccccctagttacggcctagatgagattggagggtggggggcaataccaacactg
gagtctctaggcctgagtgtcacaaagtctgagaagggaatgcatttcaaaggaggagag
aatgcagctctcggaagagtccatgagtacttttggaagaaggatcagctgaaagtctac
aaggagaccaggaatggcatgttaggtccagattactccacaaaattctctccttggctt
gcttctggcagtctttcgccacgttacatttgcgaagaggtgaaaagatatgagaagcaa
agagtagcaaatgattctacatactgggttttgtttgagttgatatggagagactacttc
aaatttctatcagcaaaatatgggaactccatttttcacctaggaggtccgaggaaagta
gtatccaaatggagtcaggatcaagcattgtttgaatcttggagagatggtcgaactggc
taccctcttattgatgccaacatgatggagctttcagccactggtttcatgtctaaccgt
ggccgtcagattgtctgctcatttcttgtccgagatatgggtattgattggagaatggga
gcagaatggttcgagacatgcttattggattatgacccagcttcaaattatggtaactgg
acatatggagcaggagttggcaatgatccacgagaagatcgatacttcagtatcccaaag
caagccaaaacgtacgatcctgaaggggagtacgtctcatactggttaccagaactccgg
tcgctggcgaaggaaagaagaaacttcccaggggcgtcatacatcaggcagatcgtccca
cttaagttcgatggtggaaatcagaaaaaagatcagcagttcaacaggcagagaaggccg
aacatgtacaggagatga
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