Panicum virgatum (switchgrass): 120704234
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Entry
120704234 CDS
T07260
Name
(RefSeq) glutamate receptor 3.4-like isoform X1
KO
K05387
glutamate receptor, ionotropic, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvir04040
]
120704234
Ion channels [BR:
pvir04040
]
Ligand-gated channels
Glutamate (ionotropic)
120704234
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
SBP_bac_3
Lig_chan-Glu_bd
ATG27
Motif
Other DBs
NCBI-GeneID:
120704234
NCBI-ProteinID:
XP_039844478
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Position
4K:44260357..44266182
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AA seq
938 aa
AA seq
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MGALQVMLPLLVLLAAAARLVAAAGARPSEVAVGALFTYDSTIGRAARLAIELAVDDVNA
DRTVLAGTQLKLITQDTNCSGFLGTIEALQLMENNVVAVIGPQSSGIGHVISHVVNELHV
PLLSFAATDPTLSASEYPYFIRTTISDYFQMNAVASIVEHYQWKEVTAIFVDDDYGRGGV
SALGDALAEKRARISYKAAIPPNSNTDMINDVLFRANMMESRVMVVHVNPDTGMSIFSIA
NKLQMLASGYVWIVTDWLAAVLDSSASRDLKYMSHIQGLIVLRQHTPESAAKNKFISKWN
GVARNRSITSGLNSYGFYAYDSVWAVAHGIDQFLNSGQQINFSTDPRLHDSNGSNLQLST
LKIFDGGEQMLQQLLLTNFTGLTGPVQFNSDRDLVRPAYDILNIGGSGSQLIGYWSNYSG
LSVTAPEILYQKPPNTSSFVQRLHNVVWPGDSTTTPKGWVFPNNGQPLRVGVPMKASFKE
LVAGGRGPNNVTGYCVDIFNAAINLLPYPVPCQFITIGDGTKNPNYDDIINMVASNSLDA
AVGDFAIVRNRTKIAEFTQPYIESGLVIVAPVKQATSSAWAFLKPFTLEMWCVTGALFLF
VGIVVWILEHRTNEEFRGSPRRQVITIFWFSFSTMFFAHRQNTVSALGRFVLIIWLFVVL
IINSSYTASLTSILTVQQLATGITGIDDLISSALPIGYQAGKFTRNYLIEELNIPESRLI
PLNTIQEYADALKHGPKDGGVAAIVDEMPYVDIFLSYHCNFRVVGQEFTKEGWGFAFQRD
SPLAADLSTAILQLSESGQLQRIHDEWLTRSSCSSDDSEVGATRLGLGSFWGLFLVCALI
CLLALLVFFIRVCWQYSKYSNSEAAGEPSAADANAAAAAVAADAAERQRRPSRLGSFKEL
IQFVDKKEEEVRRTMKRRSSEKDNQPAGSSDVQSVVSA
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgcttcaggtgatgcttccgctcttggtgctgctcgccgccgcggcgaggctt
gtcgcggcggcgggggcgcggccgagcgaggtggccgtgggcgcgctcttcacctacgac
tccaccattggccgcgcggcgcggctcgccatcgagctcgccgtcgacgacgtcaacgcc
gaccgcaccgtgctcgcggggacccagctcaagttgatcacccaggacaccaactgcagc
ggctttctcgggaccatcgaagcattgcagctaatggaaaacaatgtcgttgccgttatt
ggcccacaatcctctgggataggccatgtcatttcccatgttgttaatgagctacatgtt
cctcttctatcatttgcggccacagacccaactctttctgcatcagagtacccttacttc
ataaggacaaccataagtgactacttccaaatgaacgccgttgctagcattgttgaacac
tatcagtggaaagaggtaactgctatattcgttgatgatgattatgggcgaggtggtgtc
tcagcccttggtgatgcacttgcagaaaagagggcaaggatttcatataaggcagctatt
cctcctaactcaaatacagacatgatcaacgatgtattgttcagagcaaatatgatggaa
tcaagggtcatggttgtgcatgtcaatcctgacacggggatgagcatattttctattgct
aacaagctccagatgctggccagcggctatgtctggatagtgactgattggctagctgct
gttctggattcctcagcgtctagagatcttaaatatatgagtcatattcagggactaatt
gttcttcgtcagcacactcctgaatctgctgccaagaataagttcatatctaaatggaat
ggtgtggctcgtaatagaagtattacttctggcttgaactcatacggcttttatgcatat
gactcagtttgggctgttgctcatggtattgatcaatttctcaatagtgggcaacagatc
aacttctctacagatccaagattgcacgattctaatggaagcaatttgcagctatcaact
ctcaagatatttgatggtggtgagcagatgctacagcaacttctcctcacaaattttaca
ggcctaactggtccagtccaatttaattcagaccgcgatttggtacgcccagcatatgat
atccttaatattggtggttctggctcccagttgatcggctattggtccaattactcaggc
ctctctgtaactgctcctgaaattttgtatcagaagccaccaaatacttcttcatttgtc
cagcggctccacaatgtggtctggccaggtgattccaccactacaccaaaggggtgggtt
ttcccaaacaatggacagcctctgcgagttggtgttccaatgaaagcaagctttaaggaa
ctagtggcaggtggcaggggccctaataatgtgactggttactgtgttgatatattcaat
gcagcaattaatctgcttccttatccagttccctgccaattcataacaataggggatggt
acaaagaacccaaactatgacgatattattaatatggttgcttccaattcccttgatgca
gctgttggtgactttgctattgtgagaaatagaacaaagattgcagaattcacgcagcct
tatattgaatcagggcttgtgatagtagcaccagtgaaacaagcaacttcaagtgcctgg
gctttccttaaacctttcacattggagatgtggtgtgtgacaggtgctctttttcttttt
gtggggatagttgtttggattcttgaacatcggactaatgaggagtttcgaggctctcca
cgacgacaagttataacaatattttggtttagcttctcaacaatgttctttgcacacaga
cagaacactgtaagtgcacttgggcggttcgtgttgatcatatggttgtttgttgtgctg
atcatcaattcaagttatactgcaagtttgacgtcaatcctcacagtccaacagctagca
acgggaataactgggattgacgatttgatttcgagtgctttacctattggatatcaggcc
ggaaaatttaccagaaattacctgatcgaagagctcaatattcctgagtctcgactgatt
ccacttaatacaatccaggaatatgctgatgcccttaaacatggaccaaaagatggcggt
gttgctgcaattgttgatgagatgccatatgttgacattttcttgtcatatcactgcaat
ttcagagtagtgggacaggagttcacgaaggagggatggggctttgcattccagagagat
tccccccttgctgcagacttatcaacagccatccttcagctttcagagagtggccagctt
cagagaattcacgacgagtggttgacgcggtctagttgctcctctgatgacagtgaagtg
ggagcgaccaggcttggccttggaagcttttggggccttttcctcgtttgtgccctgata
tgtctccttgctctgctggtgttcttcatacgagtctgctggcagtatagcaagtactcc
aattctgaagctgctggtgagcccagtgcagctgatgctaatgccgctgccgctgccgtt
gccgctgatgctgccgaaagacagcgaaggccatcacgccttggcagcttcaaagaactg
atacagtttgtcgacaagaaggaggaagaagttaggagaacgatgaaacgaagatcaagc
gagaaagataaccaacctgcaggatcctcagatgttcagtcagtggtttcagcatag
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