Panicum virgatum (switchgrass): 120704235
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Entry
120704235 CDS
T07260
Name
(RefSeq) glutamate receptor 3.4-like isoform X1
KO
K05387
glutamate receptor, ionotropic, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvir04040
]
120704235
Ion channels [BR:
pvir04040
]
Ligand-gated channels
Glutamate (ionotropic)
120704235
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
SBP_bac_3
Lig_chan-Glu_bd
Motif
Other DBs
NCBI-GeneID:
120704235
NCBI-ProteinID:
XP_039844480
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Position
4K:44269153..44276127
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AA seq
925 aa
AA seq
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MGAAQLVAWFLALAAAAGAAVSAAGARPSEVALGALFTYDSTIGRAARLAIELAVDDVNA
DGTVLAGTKLSLKSRDTNCSAFLGTVEAFQLMEENVVAVIGPQSSGIGHVISHVANELHV
PLLSFAATDPALAALEYPYFLRTTISDYFQMNAVASIVDYYQWKRVTAIYVDDDYGRGGV
SALGDALATKRAIISYKAAIPPNSNADVISDVLVRANMMESRVMVVHVNPDTGKRIFSAA
NKLQMVASGYVWIVTDWLAAVLDSSASRDLKDMSHIQGLIVLRQHTPESDAKNKFISKWN
TMARNRSVTSGLNSYGFYAYDSVWTVARAIDQFLDSGQQINFSTDPRLHDSNGNTLRLST
LKIFDGGEQMLQQLLLTNFTGVTGPVQFGSDRNLVRPAYDILNVGGSGSRLIGYWSNHSG
LSIAAPEILYQKPPNTSAQQLYNVLWPGDSTTMPRGWVFRNNGQALRVGVPNKASFKDLV
SSRGPGNVTGYCIDVFNTAIKLLPYPVPVQFVTIGDGTKNPSYIGIVSMVAANTLDAAVG
DFAIVRNGTAISEYTQPYVEAGLVIVAPVKQTPPSAWAFLKPFTLEMWCVTGALFILVGV
VVWLLEHRINEDFRGSPRRQVITIIWFSFSTMFTAHRENILSALGRFVLIIWLFVVLIIN
SSYTASLTSILTVQQLDTGITGLDSLIASSLPIGYQNGKFTKKYLIQELNIPESRLVALN
TIQEYADALNRGPNYGGVAVIVDEKPYIDIFLSYYCNFRIVGQQFTREGWGFAFQRDSPL
AADMSTAILQLSESGQLQRIHDEWFTRRGCASDDESQVGATRLGVGSFSGLFLMCALICI
FALVVFFIRICWQYNQYSSSEAAREPSAADADAIQRRPSGCSFKELLQFVDKKEEEIRRK
MKRRSSDKDNQAAGSSGALSVTSAY
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcggctcagctggtggcttggttcttggcgctcgccgccgccgcgggggcggcg
gtgtcggcggcgggggcgcggccgagcgaggtggccctgggcgccctcttcacgtacgac
tccacgattggccgcgcggcgcggctcgccatcgagctcgccgtcgacgacgtcaacgcg
gacggcacggtgctcgcggggacgaagctcagtctgaagagccgcgacaccaactgcagc
gcctttcttgggaccgtcgaagcatttcagcttatggaggaaaatgtagttgctgtgatt
gggccgcagtcctcggggataggccatgtcatctctcatgttgctaatgagctacatgtt
cctcttctgtcatttgcggccacagatccagctcttgctgcattagagtatccctacttc
ttaagaacaaccataagtgactacttccaaatgaatgctgttgctagcattgttgattac
tatcaatggaaaagagtgactgctatatacgttgatgatgattatgggcgaggtggtgtg
tccgcccttggtgatgcacttgcaacaaaaagggcaatcatttcatataaagcagctatt
cccccaaattcaaatgcagacgtgatcagtgatgtactggttagagcaaatatgatggaa
tcaagggtcatggttgtgcatgtcaatcctgacacgggaaagagaatattttctgcagct
aacaagctccagatggttgccagtggctatgtctggatagtaactgattggctagctgct
gtccttgattcctcagcatctagagatcttaaagatatgagtcatattcagggactgatt
gttcttcgtcagcatactcctgaatctgatgctaagaataagttcatatctaaatggaat
actatggctcgtaacagaagtgttacttctggcttgaactcatatggcttttatgcttat
gacagtgtttggactgttgctcgtgctatcgatcaattcctcgacagtgggcaacagatc
aacttctcaacagatcccaggttgcatgattcaaatggcaacactttgcgtctatcaact
ctcaagatatttgatggtggtgagcagatgctacagcaacttctactcacaaactttaca
ggtgtgacaggtccagtccagtttggttcagaccgcaatttagtacgcccagcgtatgat
atccttaatgttggtggttctggctcccgcttgattggctattggtctaaccattctggc
ctttctattgctgctccagaaattttatatcagaagccaccaaatacaagtgcccagcag
ctatacaatgtgctatggccaggtgactccacaactatgcctaggggttgggtattccga
aacaatggccaggctctgagagttggggttccgaataaagcaagctttaaggatttagtg
tcaagcagaggccctggtaatgtgacgggttattgcattgatgtattcaacacggcaatt
aagctgcttccttacccagttcctgtccaatttgttactattggggatggcacaaagaac
ccaagctatattggcatcgttagcatggtagctgccaatacccttgatgcagctgtaggc
gactttgctatagtcagaaatggaacagcgatctcagaatatacacagccttatgtcgag
gcagggctcgtgatagtagcgccggtgaaacaaacacctccaagtgcctgggctttcctc
aaacccttcacattggagatgtggtgtgtcacaggtgctctttttattttggtgggggta
gtagtttggcttcttgaacatcggattaatgaggattttcgaggctctccacggcgacaa
gttataacaataatctggttcagcttctcaacaatgttcaccgcacacagagaaaacatc
ttaagcgcgcttgggcggttcgtgttgataatatggttatttgttgtgctgatcatcaat
tcaagttatactgctagcttgacgtcaatcctcacagtccaacagctcgacacaggaatt
acagggcttgatagtttgattgccagttctttgcctattggataccagaatggaaaattt
accaaaaagtacctgattcaagaactcaatattccagagtctcgattggtagcactaaat
acgatccaggaatatgctgatgccctcaaccgtggaccaaactacggcggtgttgccgtg
attgtggatgagaagccgtatattgatatcttcctgtcatactactgcaacttcagaata
gtagggcagcaattcacaagggaaggatggggctttgcattccagagggactcccctctt
gctgcagacatgtcaacagccatacttcaactttcagagagtggccaacttcagagaatt
catgacgagtggttcacgcgtcgtggttgcgcctctgatgatgagagccaggtgggagca
accaggcttggcgtcggaagcttttcaggccttttcctcatgtgtgccctgatatgtatc
ttcgctctggtggtgttcttcatacggatctgctggcaatacaaccagtactccagttct
gaagctgcccgtgagcccagtgcagccgatgctgatgctatccagcggaggccatcaggc
tgcagcttcaaagagctgttacagtttgtcgacaagaaggaggaagaaatccggaggaag
atgaaacgaagatcaagcgacaaagataaccaagctgcaggttcctctggtgcgctgtca
gtgacttcagcgtactaa
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