Panicum virgatum (switchgrass): 120704268
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Entry
120704268 CDS
T07260
Name
(RefSeq) serine/threonine-protein kinase rio2-like
KO
K07179
RIO kinase 2 [EC:
2.7.11.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120704268
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120704268
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120704268
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120704268
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: Other
RIO family [OT]
120704268
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-40S particles
Kinases
120704268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
Rio2_N
ABC1
APH
OspG_kinase
Kdo
Pkinase
TCAD9
Motif
Other DBs
NCBI-GeneID:
120704268
NCBI-ProteinID:
XP_039844528
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All DBs
Position
4K:44510533..44514182
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AA seq
491 aa
AA seq
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MKLDANALRYLTKDDFRVLTAVEMGMRNHEIVPAELVDRIAGLKHGGTYKVLRNLLKNKL
VHHDATKYDGYRLTYLGYDFLAIKTLVNRGVFASVGRQIGVGKESDIFEVATEDGTVLAM
KLHRLGRTSFRAVKSKRDYLRHRRSFNWLYLSRLAALKEFAFMKALGDHGFPVPTAVDCN
RHCVIMSLVQGYPLVQVKELQNPDDVFDTILGLIVRLAEHGLIHCDFNEFNIMIDDDEKI
TVIDFPQMVSVSHRNAQMFFDRDIECIYKFFNKRFNLTSEKNEEQDGSESDGEGNTRPSF
LSVKKTAGSLDKELAASGFTRKEQVEMEKYIDEDAEGHDSGSDDDDEEEEVGDAVPIDSL
RIDQDHNDEPDCNLASRDSGVPGSFSEEHGTSCSGENRLESSPSGRNGDAKEPLESEGKM
LSQEDEDNDDSLSDDDEEEKDAELTKKLNKQRKKAIAAAHGRRRPVSSRNAYKDKGKGTM
NSKIQRQACKW
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgacgcgaacgccctgcgctacctcaccaaggacgacttccgcgtcctcacc
gccgttgagatgggcatgcgcaaccacgagattgtcccagctgagcttgttgacaggatc
gctggactgaagcatggtggcacatacaaagtgctgaggaatcttttgaagaacaaattg
gtgcaccatgatgccactaaatatgatggatatcggctcacctatcttggatatgacttc
cttgccatcaagactttggttaatcgaggagtttttgcttcggttggccgtcagattggt
gttggaaaggagtcagatatatttgaggttgccacagaggatggtacagtgcttgcaatg
aagctccataggttgggcaggacatcttttagggctgtgaaatctaagcgtgattatcta
aggcatcgaaggagctttaattggctgtacctctctcgacttgcagccttgaaggaattt
gcctttatgaaggctttaggagaccatggtttccctgttccaactgctgtggattgcaat
cggcattgtgtgatcatgtcacttgttcagggatatcctctggttcaagtgaaagagtta
caaaatccagatgatgtttttgacacaattcttggtcttatcgttcgtttggcagagcat
gggctgatacattgcgactttaatgagttcaatatcatgattgatgatgatgaaaaaatt
acggttattgacttcccacagatggtatctgtttcgcatcgtaatgcgcaaatgtttttt
gaccgagacattgagtgtatctacaagtttttcaacaagaggttcaatcttacatcagag
aaaaatgaagaacaagatggatctgaaagtgatggtgaagggaataccaggccatccttt
ttgtctgtgaaaaagactgctggttccttggacaaggaactagctgccagtgggtttacc
aggaaggagcaagtggagatggagaagtacattgatgaagatgctgaaggacatgattcc
ggctcagatgatgatgatgaggaggaggaggttggtgatgctgtgcctattgattccttg
aggatagaccaggaccataatgatgaacctgattgtaatcttgcctcgagggattcaggt
gtacctggatctttttctgaagagcatggaacaagttgtagcggtgagaacagattggaa
agttctccctcaggtagaaatggggatgctaaggaaccacttgagtcagagggcaagatg
ctttcccaggaagatgaagataatgatgatagcttgtcggacgatgatgaggaggagaaa
gatgcggagctcacgaaaaaattaaacaagcaaaggaaaaaggcaatcgcagctgcccat
gggcggagaaggcccgtgtcctctaggaatgcctacaaggacaaagggaagggcaccatg
aactccaaaatccaaaggcaggcgtgcaaatggtga
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