Panicum virgatum (switchgrass): 120704290
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Entry
120704290 CDS
T07260
Name
(RefSeq) EH domain-containing protein 1-like
KO
K12483
EH domain-containing protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120704290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120704290
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120704290
Membrane trafficking [BR:
pvir04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
120704290
Exosome [BR:
pvir04147
]
Exosomal proteins
Proteins found in most exosomes
120704290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5600
EHD_N
Dynamin_N
EH
MMR_HSR1
EF-hand_7
EF-hand_1
GTP_EFTU
EF-hand_6
EF-hand_5
NPA
TsaE
AAA_16
Motif
Other DBs
NCBI-GeneID:
120704290
NCBI-ProteinID:
XP_039844569
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All DBs
Position
4K:44755745..44761877
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AA seq
543 aa
AA seq
DB search
MEIGRYPVSGCSKEHQKIYQEWFALADSDGDGRITGPDAIKFFGMSKLSRPDLKQVWAIA
DSRRQGYLGFPEFVAAMQLVSLAQAGNEITQDSLKRDDLGSLNPPVMEGLDALLAKSKHM
VKRVDPELDGFPQEQSPSNKWFSSKSSKKIPLTAVTSVIDGLKKLYIEKLKPLEVTYKFN
DFVSPLLTSSDFDAKPMVMLLGQYSTGKTTFIKHLLRTSYPGAHIGPEPTTDRFVVVMSG
TDERTIPGNTIAVQADMPFSGLTTFGTAFLSKFECSQMRHPLLEHITFVDTPGVLSGEKQ
RTQRSYDFTGVTSWFAAKCDLILLLFDPHKLDISDEFKRVIGSLRGHDDKIRVVLNKADQ
VDTQQLMRVYGALMWSLGKVLNTPEVSRVYIGSFNDKPVNESAVGPLGKELFEREQDDLL
SDLKDIPKKACDRRINEFVKRARAAKIHAYIIGHLKKEMPTMMGKAKAQQRLIDNLQDEF
AKVQREYHLPAGDFPYVEHFKEVLSGYSFDKFEKVKPKMIQAVDDMLGYDIPELLKNFRN
PYE
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgggcgctaccccgtgagcggctgctccaaggagcaccagaagatctaccag
gagtggttcgcgctcgcggactcagatggggatggccgcatcacgggccctgacgccatc
aagttcttcggcatgtccaagctctcccgccccgacctcaagcaggtatgggcgatcgcg
gactccagacggcaggggtacctgggtttccccgaatttgtcgcggcaatgcagctagtc
tctctggctcaagcagggaatgagatcactcaagatagccttaagcgcgatgatttaggc
agtttgaatccacctgtgatggaaggtttggatgctctacttgcgaaatctaagcatatg
gtgaagcgggtggatccagaattggatggatttcctcaggaacaatcaccttcaaataaa
tggttcagctcaaagtcatcaaagaagataccgctgactgctgttacttctgtcatcgat
ggcttgaaaaaattatacatcgaaaagctaaagcctttggaagttacatacaaattcaat
gatttcgtttctcctttgctgacgagtagtgattttgatgcaaagccaatggttatgctc
ttaggtcaatattctactggtaaaacaacttttatcaagcatctgctaagaacaagctat
ccaggtgcccatattggaccagagccaacaacagacagatttgtcgtagtcatgtcagga
actgatgaaaggactattcctgggaatactattgctgttcaagccgacatgccttttagt
ggtcttacaacatttgggactgcatttttatccaagtttgagtgctctcagatgcgacat
ccactgcttgagcatatcacatttgtcgacacacctggtgttctttctggtgaaaagcaa
cggactcaacgtagctatgatttcactggtgtgacatcatggtttgctgcgaagtgtgat
cttattcttcttctgtttgatcctcataagcttgatatcagcgatgagttcaaacgtgtc
atcggatctttacgtgggcatgatgataaaatacgtgttgttttaaacaaggcagatcaa
gtagacactcaacagcttatgagagtttatggtgcattgatgtggtctctcgggaaagta
ttgaatacacctgaggtttcacgtgtttatattgggtcattcaatgacaaaccagtaaat
gaatcagctgttggtccacttggaaaggaactatttgagagagagcaagatgatctcctt
tctgatctcaaagatatccccaagaaagcatgtgatcgtcgaatcaatgaatttgttaaa
cgtgctagagctgccaagattcatgcttatataattggccatctaaagaaggagatgcct
acaatgatgggcaaagcgaaagcccaacaacgactcatagacaatttgcaggatgagttt
gcgaaggtgcaacgggaataccatcttccggcaggggatttcccctacgtggagcacttc
aaagaggtcttgagtgggtatagcttcgacaagtttgagaaagtcaaacccaagatgata
caggcagtggatgatatgcttgggtacgacattcctgaacttctcaagaacttcaggaac
ccatatgagtga
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