Panicum virgatum (switchgrass): 120704291
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Entry
120704291 CDS
T07260
Name
(RefSeq) probable beta-1,4-xylosyltransferase IRX14
KO
K20871
putative beta-1,4-xylosyltransferase IRX14 [EC:2.4.2.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120704291
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120704291
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_43
DUF4127
TMEM191C
Motif
Other DBs
NCBI-GeneID:
120704291
NCBI-ProteinID:
XP_039844570
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Position
4K:44762885..44766310
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AA seq
530 aa
AA seq
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MMKSLLPQSQLRRSSARPSGAAAAAGGDGAAADGGGALARAPASGTFWFLLHALCCLISL
FLGFRFSRLLFFLLFSTTALYHSTTSSSSAAVLRATTTTTTTTTTTTTTTNIFTLSFAAA
NPPPSNPANRTALEAASAADKGATSGNPQSHVVVGRHGIRIRPWPHPDPVEVMRAHQIME
RVQEEQRRWYGVKEPRQVLVVTPTYSRAFQALHLTGLLHSLRNVPYPLTWIVVEAGGTTN
ATASLLGRSGLTFVHVPFPDHMPHDWADRHATENRMRLHALRVIRERKMDGVVVFADDSN
VHSMELFDEVQKVQWMGAVSVGILAHTGAADQPHLSEEDKQNMPLPVQGPACNSSGHLAG
WHTFNSLPFSGKTATVVGEAAPVLPRGLEWAGFVLNSRMLWKEAEGKPDWVKDLDAVGEN
GEEIENPLTLLNDPSSVEPLGNCGKKVLLWWLRVEARADSKFPQGWVIEPPLDIVVPAKR
TPWPETTTELPSELLDDKQDQEDRRLSRANKSSRPRSTTKRKGDLQGQVN
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagtcgctgctgccgcagagccagctgcggcgctcgtcggcgcggccgtcgggg
gccgccgccgccgcgggcggagacggggccgcggctgacggcggcggggccttggcgcgg
gcgcccgcctcgggcaccttctggttcctgctccacgcgctctgctgcctcatctcgctc
ttcctcgggttccgcttctcgcggctcctcttcttcctgctcttctccaccaccgcgctc
taccactccaccacctcgtcctcctccgccgcggtcctgcgcgccaccacgacgaccaca
accaccacgaccacgacgaccaccaccaccaacatcttcacgctctccttcgcggcggcg
aaccctccgccctccaaccccgccaaccgcaccgcgctggaggcggcctcggcggcggac
aagggcgcgacctccgggaacccccagagccacgtggtggtggggcggcacgggattcgg
atccgcccgtggccgcacccggaccccgtcgaggtgatgcgggcgcaccagatcatggag
cgcgtgcaggaggagcagcgccgctggtacggcgtcaaggagccgaggcaggtgctcgtc
gtcacgccgacctactcccgcgccttccaggcgctccacctcaccggcctactccactcc
ctccgcaacgtgccgtacccgcttacctggatcgtcgtcgaggcgggcggcaccaccaac
gccacggcgtccctgcttgggcgctccggcctcaccttcgtccacgtccccttccctgac
cacatgccccatgactgggcagaccgccatgctactgagaaccggatgcgcctccatgcc
ctgcgggtgattcgggagaggaagatggatggcgttgtggtatttgcggatgacagcaat
gttcatagcatggagctttttgatgaggtgcagaaggtccagtggatgggtgctgtatcc
gttggaatcctagcacatactggagcggcagaccaaccgcacctcagcgaggaggacaag
cagaacatgcctcttccagttcaaggccctgcttgcaactcctctgggcatctggctgga
tggcacacatttaactcattgccattttctgggaagactgccacggtggttggcgaggca
gcccctgttctgcccagaggtttggagtgggctggctttgtgttgaactcgagaatgctg
tggaaggaggcagagggcaagcctgactgggtgaaggatctcgatgctgtcggtgagaat
ggagaggagattgagaacccacttactctattgaatgatccgtcctctgttgaaccactg
gggaactgtggcaagaaggtcctgctgtggtggctccgcgtggaagctcgggctgatagc
aagtttcctcagggatgggtgattgagccacctttggacattgtcgttcctgcaaaacgc
actccatggcctgaaaccaccaccgagcttccatccgagttgttggatgacaagcaagac
caggaagataggcggttgtcaagagccaacaaatcatctcggccccgaagcaccacgaaa
cggaagggtgaccttcaagggcaagtgaactga
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