Panicum virgatum (switchgrass): 120704315
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Entry
120704315 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120704315 isoform X1
KO
K14565
nucleolar protein 58
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120704315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120704315
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
120704315
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOP5NT
Motif
Other DBs
NCBI-GeneID:
120704315
NCBI-ProteinID:
XP_039844595
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Position
4K:45095987..45099678
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AA seq
428 aa
AA seq
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MIKPSIPCRPAARLARLILAAVATGCVRRRGDWTARSTCAICDLEFSTSTAMARKGWKRR
GRSSTPAVPKTQICTIVDELGNTGLVLLLFETPSGFAIFNIDGVQLFLPKAEENIWANYV
KDYMTYRVIWLKEFKTFKDKSNAFNHTGMNSELAQMIKKWHLPGQKLAVGKQEHKSIIEQ
KLKISCLFNDAVMEVMWGIKHLMKSLVPQEESELPMEERLQMSYGLKTVLNRHGFSVKPE
MVNERIIDTACVLYDCDLCETKHSEFLLSAGECIMEVSGIACQGWSLMKIATALKVLYDP
ETDIVYDDPESMLSKDELLRLKADARLYDGKLLKRTGAAVYNEIVWAREVKDDATRLLNI
LVHDDGHAALPQNSVPPGRGDHALTLLSLEVEKQEGRHMGMPENPPMPLGRAGSISEPAV
QEVKQEMV
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaccatccatcccgtgccgtccggctgctcggctggctcgtctcatcctagcc
gcagtggcaacaggttgcgtacgccggcgcggcgactggacagcacgcagcacatgcgct
atctgcgatctcgagttctcgacctcgacagcgatggcgcgaaaaggctggaagcgacga
gggcgttcttccacaccagccgttccgaagacgcagatttgtactattgttgatgagttg
gggaacacgggcttggtcttactgctgtttgagacaccctctggatttgccatattcaac
attgatggtgtccaattgtttctaccaaaagcagaggagaacatctgggcaaactatgtc
aaagattatatgacataccgcgttatctggctgaaggaattcaagactttcaaggacaag
tccaatgcatttaaccacactggtatgaacagtgagcttgcccagatgatcaagaaatgg
catctcccaggtcaaaaattagctgttggaaagcaggagcataaatcaatcattgaacag
aagttgaaaatatcctgcctttttaatgatgctgtgatggaggtgatgtggggcataaaa
catctcatgaagagtctagtgcctcaggaagaatctgagctgcctatggaagagcgcctt
cagatgagttatggattgaagactgtgctgaatcgtcatggtttcagtgttaaaccagag
atggttaatgagcgtattattgatacagcatgtgtcctgtatgactgtgatttatgtgag
acgaagcattctgaattcttgcttagtgctggtgagtgcattatggaggtatcaggtatt
gcgtgtcagggttggagcttaatgaaaattgcaacagctctcaaggttttatatgatcct
gaaactgacattgtatatgatgatcctgaatcgatgttatcgaaggacgagctacttagg
ttgaaagctgacgcacgtctgtatgatggtaagctactgaagcgtaccggcgcggcagtc
tacaatgaaattgtgtgggcccgtgaagtcaaggatgatgcaacaagactattgaacatt
ttggtccatgacgatggacatgcggccctgcctcagaattcagtgccaccggggagagga
gatcacgcactgacccttctgtccttggaggttgagaagcaagaaggtcgacatatggga
atgcctgagaatccacctatgccactggggagagcaggatctatctccgagcctgctgtc
caggaagttaagcaggaaatggtatga
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