KEGG   Panicum virgatum (switchgrass): 120704351
Entry
120704351         CDS       T07260                                 
Name
(RefSeq) DNA-directed RNA polymerases II and V subunit 8A-like
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03020  RNA polymerase
pvir03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    120704351
  09124 Replication and repair
   03420 Nucleotide excision repair
    120704351
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvir03021]
    120704351
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120704351
Transcription machinery [BR:pvir03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     120704351
  RNA polymerase III system
   RNA polymerase III
     120704351
  RNA polymerase I system
   RNA polymerase I
     120704351
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      120704351
SSDB
Motif
Pfam: RNA_pol_Rpb8 DTP-pb9_B-dom
Other DBs
NCBI-GeneID: 120704351
NCBI-ProteinID: XP_039844642
LinkDB
Position
4K:complement(45471468..45474445)
AA seq 144 aa
MVEYLFDDNFSVSRLDPDGKKFDRVTRIEAHNEQMYMQLDVATEIYPMRVGDKFNMVLAP
TLNLDGTPDTGYYTQAGRKTLADKFEYVMHGKLYKISEDSSTSSSTKVEIYASFGGLLMQ
LRCDSSSAASFELDQRLFLLIRKV
NT seq 435 nt   +upstreamnt  +downstreamnt
atggttgagtatctctttgacgataacttcagtgtgagcaggctcgatcctgatggcaag
aagtttgacagagtgacccgcatcgaagctcataacgagcagatgtacatgcagctagat
gttgctactgagatctacccgatgcgtgttggtgacaaattcaacatggtgttagctcct
actctgaatctggatggaacaccagacactggctactacacacaggctggaagaaaaaca
cttgctgacaagtttgaatatgtcatgcatggaaaactttacaagatctcagaagacagt
tccaccagctcatctactaaagtggagatctatgcatcttttggtggcctcctgatgcag
cttaggtgtgatagttccagtgcagctagcttcgagctggatcagaggctgtttcttctt
atcagaaaggtgtaa

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