KEGG   Panicum virgatum (switchgrass): 120704383
Entry
120704383         CDS       T07260                                 
Name
(RefSeq) rRNA 2'-O-methyltransferase fibrillarin 1-like
  KO
K14563  rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    120704383
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pvir03009]
    120704383
Ribosome biogenesis [BR:pvir03009]
 Eukaryotic type
  Sno RNPs
   Box C/D snoRNPs
    120704383
SSDB
Motif
Pfam: Fibrillarin GCD14 PCMT Methyltr_RsmB-F Methyltransf_31 DREV
Other DBs
NCBI-GeneID: 120704383
NCBI-ProteinID: XP_039844681
LinkDB
Position
4K:complement(45700995..45703775)
AA seq 245 aa
MKGGRKAVVQPHKHGGVFISRAKEDALCTRNMCPGESVYGEKRVSVQNEDGTKVEYRVWN
PFRSKLAAAVLGGVDNIWIAPGQRVLYLGAASGTTVSHVSDIVGPEGLVYAVEFSHRSGR
DLVNMAKKRTNVIPIIEDARHPARYRMLIGMVDVIFSDVAQPDQARILSLNASYFLKCGG
HFVMSIKANCIDCTQPAEAVFASEVEKLKLEQFKPAEQVTLEPFERDHACVGGGYRMPKK
QKPSQ
NT seq 738 nt   +upstreamnt  +downstreamnt
atgaagggcgggagaaaggcggtggtgcagccgcacaaacacggcggcgtcttcatcagc
agggccaaggaggacgcgctctgcaccaggaacatgtgccccggcgagtccgtctacggc
gagaagcgcgtctccgtccagaatgaggatgggacaaaggtcgagtacagggtgtggaac
cccttccgatccaagctggctgctgctgtgcttggcggtgttgacaacatctggattgct
cctggccaacgggtcctctaccttggtgctgcatcaggaacaaccgtgtctcatgtctct
gatattgttggaccggaagggttggtctatgctgttgagttctctcacaggagtggaagg
gaccttgtcaatatggccaagaagaggaccaatgtgatccccattattgaggatgccagg
cacccggcaaggtaccggatgttgatcggcatggttgatgttatcttctctgatgtcgca
cagccggaccaggctaggatcttatccctcaacgcctcatatttcctgaaatgcggcggt
cattttgtcatgtcaatcaaggcgaactgcatcgactgcacgcagcctgcggaggcagtg
tttgccagcgaggtggagaagctgaagctggagcagttcaagccggcggagcaggtgacc
ctggagcccttcgagcgcgaccacgcctgcgtcggcggcggctacaggatgcccaagaag
caaaagccatctcaataa

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