Panicum virgatum (switchgrass): 120704467
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Entry
120704467 CDS
T07260
Name
(RefSeq) protein SHI RELATED SEQUENCE 1-like
KO
K27807
short internodes/stylish family transcription factor
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120704467
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
120704467
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
120704467
NCBI-ProteinID:
XP_039844796
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Position
4K:46605325..46607788
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AA seq
336 aa
AA seq
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MAGFSLRGGGGGGGRGGDRAGDHPIGADSLFLYARGAAAAAADTAASGGGGGGIGFQLWH
PHQQAAAAPHTSQFFSSGVATGVVLGFSSHDGSGGIGGPGGGGAGGGRAGTSCQDCGNNA
KKDCAHMRCRTCCRSRGFSCPTHVKSTWVPAAKRRERQQQLAALFRGAANSNSASAAAAA
AAASKRPRELVRSLGRLPSANSAMVTTTTSSGDGGGGRFPPELNVEAVFRCVRIGPVDEP
DAELAYQTAVSIGGHTFKGILRNHGPADDAAVGQLPPSSAEYHQLTGQAREGSSPAGSSE
AAATVATSAAVLMDPYPTPIGAFAAGTQFFPHNPRT
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggctggcttctctctgagaggcggcggaggaggaggtgggagaggcggagaccgcgcc
ggcgatcacccgatcggcgccgacagcctgttcctgtacgcgcgcggggcggccgccgcg
gccgccgacacggcggccagcggcggcgggggcggggggatagggttccagctatggcac
ccgcaccagcaggcggccgccgcgccgcacacgtcgcagttcttctcttccggcgtggcg
acgggagtcgtgctggggttctcctcgcatgacggcagcggtgggatcggaggccctggc
ggcggaggcgccgggggcggcagggcggggacgagctgccaggactgcggcaacaacgcc
aagaaggactgcgcccacatgcggtgccggacctgctgccggagccgcggcttcagctgc
ccgacccacgtcaagagcacctgggtccccgccgccaagcgccgcgagcgccagcagcag
ctcgccgcgctctttcgcggcgccgccaacagcaacagcgccagcgccgccgccgccgct
gcggccgcgagcaagcggccgcgcgagctcgtccggtccctcggccgcttgccgtcggcc
aactccgcgatggtcaccaccaccacttcctcaggagacggcggcggtgggaggttcccg
ccggagctgaacgtggaggcggtgttccggtgcgtgcggatcgggccggtggacgagccg
gatgcggagctcgcgtaccagacggcggtgagcatcggcgggcacactttcaaggggatc
ctgcgcaaccacgggccggcggatgacgcggcggtgggccagctgccgccgtcctcggcg
gagtaccaccagctgacggggcaggcgagggaagggtcgtcgccggcggggagcagcgag
gcggcggcgacggtggcgacgtccgcggcggtgctgatggacccgtacccgacaccgatc
ggcgccttcgccgcaggcacccagttcttccctcataaccctagaacctag
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