Panicum virgatum (switchgrass): 120704487
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Entry
120704487 CDS
T07260
Name
(RefSeq) novel plant SNARE 11-like
KO
K08494
novel plant SNARE
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120704487
Membrane trafficking [BR:
pvir04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
120704487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
MCPsignal
ING
Zw10_N
DUF948
Occludin_ELL
PLU-1
Prominin
Vps53_N
Syntaxin_2
JAKMIP_CC3
DUF5089
Motif
Other DBs
NCBI-GeneID:
120704487
NCBI-ProteinID:
XP_039844823
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All DBs
Position
4K:complement(46833637..46837023)
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AA seq
256 aa
AA seq
DB search
MDLASVNEELAEIDGQIGDILRALQNGFQKLDKIKDPNRRSRQLEELTDKMRDCKRLIKD
FERVSKDEVGRTDPETAKMLHDRKQSMIKELNSYVALKKQYASENKRIDLFDGPSVEDDY
GEENVLLASNMTNQQLMDQGNQLMDGTDQAIARSKQTVQETINVGTETAAALKAQTEQMS
RVINELDSIHFSIKKASQLVKEIGRQVATDRCIMAMLFLIVAGVIAVIVVKIVNPHNKDI
PNIPGLAPPVSRRLLR
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggatttggcgtcggtcaacgaggagctggccgagatcgacggacagatcggcgatatc
ctccgagcattgcagaatgggtttcagaagctggacaagatcaaggatcccaaccgccgc
agcaggcagcttgaggagcttactgataagatgcgagattgcaaaagacttatcaaagac
tttgagcgagttagcaaagatgaggtagggcgtacggatccggagacagcaaaaatgctg
catgacagaaaacagtcaatgatcaaagaattaaactcttatgttgctcttaagaaacaa
tatgcaagtgaaaacaaacgaattgatctttttgatggtcctagtgttgaagatgactat
ggtgaagaaaatgtcctgttagcatcaaatatgacaaaccagcagttaatggatcaaggc
aatcaactaatggatggaactgatcaagctatcgcacgatctaaacagactgtccaagag
acaattaatgtaggcacagaaactgcagctgccttgaaagctcagaccgagcaaatgagc
agagttattaatgagctggactccatccatttctccattaaaaaggcatctcaattggtg
aaagaaatcggtagacaggttgcaactgatcgctgcatcatggccatgctttttctcatt
gttgctggagtcatagcagtaattgttgttaagattgtaaacccacacaacaaggatatt
cccaacatcccaggacttgcaccacctgtaagcaggaggctgttgagatag
DBGET
integrated database retrieval system
