Panicum virgatum (switchgrass): 120704547
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Entry
120704547 CDS
T07260
Name
(RefSeq) probable galacturonosyltransferase 3
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120704547
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120704547
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120704547
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120704547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Bap31_Bap29_C
Motif
Other DBs
NCBI-GeneID:
120704547
NCBI-ProteinID:
XP_039844912
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All DBs
Position
4K:complement(47409371..47414727)
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AA seq
695 aa
AA seq
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MASSSTAASSSAAAAAYPRTPFSLRRRPGLLAFLFVFLCFISFQVVIHVPFARSAVSQWL
FSGHQGEHQRPKNCPGCANSQDVGSADKKIAYTDQYGRIKLFKVTAREFASSSIWENPWL
PRDSQPIARTQEAAEDLLLANGSEATNLSSAETLATKSADPIKLKRQVFRRRRKEQRVQE
LLQVDKKVELEMRNAAINSSRNFDNKVRGSYNVWRQEFRFTNTDSTLRLMKDQIIMAKLY
ATIALSQKEPDMYALLMKCIKQSQTAIGDALIDSELDSSALERAKAMGHVLSSARDALYS
SSEVSRKLRAMLQSTELDIDAVKKQNSFLVQHAAKTVPMPLHCLHMQLTTDYYFRDGVTK
EHFHDAALKEEENKAKLEDRSLYHYAIFSDNVLAASVVVRSTVTNANEPEKHVFHIVTDR
LNFAAMKMWFIAHPPQLATVHVENIDNFKWLNSSYCSVLRQLESARLKEYYFKAHDPSSL
SDGNENLKYRNPKYLSMLNHLRFYMPEIHPKLDKILFLDDDIVVQKDLTPLWDIDLKGMV
NGAVETCKESFHRFDTYLNFSHPKISENFDPRACGWAFGMNMFDLKEWRKRNITGIYHYW
QDLNEDRKLWKLGTLPPGLITFYNLTYPLNRTWHVLGLGYDPAVDIVEIDNAAVVHYNGN
YKPWLDLAISKYNLYWSKYVDLDSSHVQHCYASKQ
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctcctccaccgccgcctcctcgtcggcggcagcggcagcgtatcccagaacc
cccttctccctgcggcggcgcccgggtctcctcgccttcctcttcgtcttcctctgcttc
atctccttccaggtcgttatccatgtgcccttcgccagatcggcggtgtcccagtggctc
ttctccggtcaccaaggtgagcaccaacgtcccaagaactgccctgggtgtgccaattca
caggatgtgggcagcgctgacaagaagattgcgtacaccgaccagtatggccggatcaag
ctgttcaaagtcaccgccagagagtttgcgtcgtcctctatctgggagaacccatggttg
cccagagatagccaaccgatagccagaacccaagaggctgctgaggatcttctactagcc
aatggatcagaagccaccaatctttcaagtgctgaaactctggcaactaaaagcgctgat
ccgatcaaattaaagcgacaggtatttcggcgtagaagaaaagaacagagggtacaggag
ttgcttcaggtggataagaaggttgaacttgagatgcgaaatgcggcaataaacagctca
aggaactttgataataaagttaggggcagctacaacgtatggaggcaggagttccgcttt
actaatactgattcaaccctaaggctcatgaaagatcagataataatggccaagttatat
gccactattgcactttcccagaaggaaccagacatgtatgccttgctcatgaagtgcata
aaacaaagccaaacagccattggggatgcgcttatcgatagcgaactcgattcaagtgct
ttagagagagcaaaagcaatggggcatgtgctgtcttcggctagagatgctctgtacagc
tcgagtgaagtgtcaagaaaattgcgtgctatgcttcagtctacagaactagatattgat
gcagttaagaaacaaaattcattcctggttcagcatgctgcaaagactgtccccatgccc
ttgcactgcctacatatgcagctgaccaccgattattattttcgtgatggtgtgacgaag
gagcattttcatgatgctgctttgaaggaggaagaaaataaagcaaagcttgaggatagg
tcactctatcactatgctatattttctgataatgtccttgcagcctcagtagttgtcaga
tcaactgtgacaaatgccaatgaaccagagaagcatgtgttccacattgtcactgataga
cttaattttgcagccatgaagatgtggttcatcgctcatcctccccagctggctactgtt
catgtggagaacatagacaatttcaagtggctcaattcatcgtactgttctgttctgcgg
caacttgaatcagctcggctcaaagaatattacttcaaagcacatgatccatcgtcactt
tctgatggaaacgagaatcttaagtacaggaaccccaaatatttgtctatgctcaaccat
ctaaggttctacatgccagaaatacacccgaagcttgacaagatattgtttctcgatgat
gatattgttgtgcagaaggatttgacgcccctatgggatattgatcttaaagggatggta
aatggtgccgttgaaacctgtaaagagagttttcatcgctttgatacttatctcaacttc
tcacacccaaagatatcagagaacttcgatccacgtgcttgtgggtgggcgttcggaatg
aacatgtttgacctgaaggagtggaggaagcgaaatatcactggaatataccattattgg
caagatttgaatgaggatcgcaagctgtggaagctgggtacattgcctccgggactgatt
actttctacaacctgacatacccattgaatcgtacttggcatgtcttgggccttggatat
gatccagctgttgacattgttgagatcgataatgctgcagtagttcattacaatgggaat
tacaagccctggcttgaccttgccatttccaagtacaatctgtactggtccaagtatgta
gatcttgacagctcccacgttcagcattgctatgcgagtaaacaatga
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