Panicum virgatum (switchgrass): 120704602
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Entry
120704602 CDS
T07260
Name
(RefSeq) signal peptide peptidase-like 5 isoform X1
KO
K09597
signal peptide peptidase-like 2B [EC:3.4.23.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120704602
Peptidases and inhibitors [BR:
pvir01002
]
Aspartic peptidases
Family A22: presenilin family
120704602
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Motif
Pfam:
Peptidase_A22B
PA
S-Me-THD_N
Motif
Other DBs
NCBI-GeneID:
120704602
NCBI-ProteinID:
XP_039844992
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Position
4K:47941968..47945779
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AA seq
536 aa
AA seq
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MAAAAVLALLMVSALAGAAAGGDIVHHDDEAPKIPGCNNDFILVKVQSWVNGKEGDEFVG
VGARFGPKIVSKEKHANRTKLTLADPIECCSPPKDKVSGDILLVQRGKCKFTKKAKFAEA
TGASAIVIINHVHELYKMVCERNETDLDIHIPAVLLPKDAGSALHTLLTNGNAVSVQLYS
PDRPVVDTAEVFLWLMAVGTVLGASYWSAWSAREAVIEQEKLLKDGHEGLLNVEAGGSSG
MVDINVVSAIMFVVVASCFLIMLYKLMSYWFVELLVVIFCIGGVEGLQTCLVALLSRWFK
PAAESFVKVPFIGAVSHLTLAVCPFCIAFAVVWAVFRQLPYAWIGQDILGITLIVTVIQI
VRVPNLKVGSVLLSCAFLYDIFWVFVSKRWFHESVMIVVARGDKTDEDGVPMLLKIPRMF
DPWGGYSIIGFGDILLPGLVVAFALRYDFVAKKGLQSGYFLWSMVAYGSGLLITYVALNL
MDGHGQPALLYIVPFTLGTLIALGWKRGELQNLWMRGQPERVCTHMHIPLLPASPK
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcggcggtcctggcgctgctgatggtgtcggcgctggcgggggccgcggcc
ggcggtgacatcgtccaccacgacgacgaggcacccaagatccccggatgcaacaacgac
ttcatcctggtaaaagtgcaaagctgggtcaacggcaaggagggtgatgaatttgttgga
gttggtgctcgctttggccccaaaattgtctccaaggagaagcacgcaaaccgaactaaa
ctcacgctggcagaccctattgagtgctgctctcctccaaaagacaaggtttctggggat
attcttttagttcaaaggggcaagtgcaaattcacaaagaaagcaaagtttgctgaagct
accggtgcttctgccatagtaatcataaaccatgtccacgaattgtacaagatggtctgt
gaaaggaatgagacagatcttgacatacatatacctgcagttcttctaccaaaagatgca
ggttctgctttacacacacttcttacaaacggtaacgcagtttctgtgcagctgtactct
ccagaccgtcctgtagttgatactgcagaggtatttctatggctcatggctgtcggtaca
gtcctcggtgcttcatactggtctgcatggagtgctagagaagcagttattgaacaagag
aagctcctgaaggatggccatgaaggcctactgaatgttgaggctggaggttctagtggc
atggtagatatcaatgtggtatcagcgataatgtttgtggtggttgcgtcatgcttctta
attatgctctacaaactcatgtcttactggtttgtggagctactggtggtaatcttctgc
atcggcggtgtagagggtttgcaaacatgcttggttgctctgttatcaagatggttcaag
cctgctgcagaatcttttgtgaaagtacctttcattggagctgtttcacatcttactctg
gcagtttgtccattttgcattgcatttgctgttgtatgggctgttttccgccaacttccg
tatgcttggattgggcaagatattcttggtatcacactgatagttacagtcatccaaatt
gtcagagtacccaacctcaaggtgggttcagttcttctcagttgtgccttcctgtatgac
atcttctgggtgttcgtctccaagaggtggtttcatgagagtgtgatgattgtggttgca
cgtggtgataagactgacgaggatggcgtgcccatgttgctaaaaattccacgaatgttt
gatccttggggtgggtacagcatcattggctttggtgatatccttcttcctgggctggta
gttgctttcgcactaagatacgattttgttgcaaagaagggccttcagtctggttacttt
ttgtggtcaatggtggcctatggttccggacttctgatcacatatgttgcactgaacctg
atggatgggcatggccaacctgcccttctgtacattgtgcccttcacactcggaacgttg
atcgcgctcgggtggaagagaggagagctgcagaacctgtggatgaggggacagcctgag
agagtgtgcacgcatatgcatatcccgctgctgcctgcgagcccaaaataa
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