Panicum virgatum (switchgrass): 120704647
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Entry
120704647 CDS
T07260
Name
(RefSeq) transcription factor TGAL3-like isoform X1
KO
K14431
transcription factor TGA
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120704647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120704647
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
120704647
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Gene cluster
GFIT
Motif
Pfam:
DOG1
bZIP_1
bZIP_2
bZIP_Maf
CC_Bre1
Motif
Other DBs
NCBI-GeneID:
120704647
NCBI-ProteinID:
XP_039845050
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Position
4K:8716578..8718949
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AA seq
430 aa
AA seq
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MCLCACPQLLMVWSHARVAGCEGPSSKSSSDLTAAATFVAPLAVAHGGVAPSFGMAPPPG
MAAAAADDSRFCLPWAAAAHFENWGDSGIVATSPLAETTCTDAGGDRHQAQTGGGAITQS
AAAYMDSCAASKEGSCRDQKVQRRLAQNREAARKSRMRKKAYIVELESSRAKLAQLEQEL
QRARQQGMFIASGRSGDHGGSTGGASAFDLEYARWLDEHQRHMTDLRVALGAAQQVIGDD
DLRALVDGAMLHYEQLFRLKGAATRADAFHVLSGMWASPAERFFMWLGGFRSSELLAVLA
RHVGPLTEPQLVGICGLQRSAQQAEDALSQGMEALQQALADTLAAAAGGGAAAAGADGVT
NYMGQMAVAMGKLATVENFLRQADLLRHQTLQQMRRILTARQAARALLVVSDYFSRLRAL
SSLWLTRPRD
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtgtctatgcgcttgtcctcaactcctcatggtgtggtcgcacgcgcgcgtcgcggga
tgtgaaggccccagctccaagtcctccagcgacctcaccgccgccgccaccttcgttgcg
ccgctcgccgtcgcgcatggaggggtagcgccctcgttcggcatggcgccgccgccgggg
atggccgctgcggcggcggatgacagccggttctgcctgccgtgggcggcggcggcgcac
ttcgagaactggggcgactccggcatcgtcgccacgagcccgctcgccgagacgacctgc
accgacgccggcggcgaccggcatcaggcgcagacgggtggtggagccatcacgcagagc
gccgctgcttacatggattcatgcgcggcgtctaaggaaggatcctgcagggatcagaag
gtgcagaggaggcttgcgcagaatcgcgaggcggcccggaaaagccggatgaggaagaag
gcgtacatcgtggagctggagagcagccgggctaagctggcgcagctcgagcaggagctt
cagcgggcgaggcagcaggggatgttcatcgcaagcggacgctccggcgatcatggaggc
tccaccggaggcgcgtcggcgttcgacctggagtacgcgcggtggctggacgagcaccag
cggcacatgaccgacctccgggtggccctgggcgccgcgcagcaggtgatcggcgacgac
gacctgcgcgcgctggtggacggcgcgatgctgcactacgagcagctgttccggctcaag
ggcgcggcgacccgggccgacgcgttccacgtgctgtcggggatgtgggcgagccccgcg
gagcgcttcttcatgtggctgggcgggttccgctcgtcggagctgctcgcggtgctggcg
cgccacgtgggcccgctgacggagccgcagctggtgggcatctgcggcctgcagcggtcg
gcgcagcaggccgaggacgcgctttcgcaggggatggaggcgctgcagcaggcgctggcg
gacacgctcgcggcggccgccggcggcggggcggcggcggcgggggcggacggcgtgacc
aactacatggggcagatggccgtggccatgggcaagctcgccaccgtggagaacttcctc
cggcaggcggacctgctccggcatcagacgctgcagcagatgcgccggatcctgacggcg
cggcaggcggcgcgggcgctgctcgtcgtcagcgactacttctcccggctccgggcgctc
agctccctgtggctcacgcggccgagggactga
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