Panicum virgatum (switchgrass): 120704668
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Entry
120704668 CDS
T07260
Name
(RefSeq) 3-ketoacyl-CoA synthase 6-like
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00062
Fatty acid elongation
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir04626
Plant-pathogen interaction
Module
pvir_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
120704668
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120704668
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
120704668
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GFIT
Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
Chal_sti_synt_N
Motif
Other DBs
NCBI-GeneID:
120704668
NCBI-ProteinID:
XP_039845077
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Position
4K:8891169..8893270
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AA seq
492 aa
AA seq
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MGSPAARQLRQLKPLYQHAVNHFVAVLAAPLAVAAAVGAARAGPGELLVRLQALRAAHVL
LAACVPAAAAALYLLLRPRAVYLVDYACFRTRPNCRVPFATFLEHAKLVTFVEGASIDER
SVRFMTRLLERSGLGEETCLPPAHHYIPPYRNMEASRAEVELVIFSAIDDLLAKTGLSPG
AIDILVVNCSLFAPVPSFTDMIIRRYGMREDIRNVHLSGMGCSAGLISVGLARNLLQVAP
RGAHALVVSTETITPNYYVGKERAMLLPNCLFRMGGAAALLSTSRARARFRLARVVRTLT
GAGDSAYRCVFQEEDGEGHRGINLSKDLMAIAGDALKANITAIGPLVLPASEQLLFALSF
IARRVLSDRRVKPYLPDFRTAFEHFCIHAGGRAVIDELQRSLGLSDQDVEASRMALHRFG
NTSSSSVWYELAYIEAKGRMRKGDRVWMIGFGSGFKCNSAAWECIAPARTAEGPWEDSIC
RYPVDIPEVLKH
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgggctcgccggcggcgcgccagctgaggcagctgaagccgctgtaccagcacgcggtg
aaccacttcgtggccgtgctcgcggcgccgctggccgtggcggccgccgtcggcgcggcg
cgcgccgggcccggggagctgctcgtccggctgcaggcgctccgggcggcgcacgtgctc
ctcgccgcgtgcgtccccgccgcggcggcggcgctgtatctcctgctgcggccgcgggcg
gtgtacctggtcgactacgcctgcttccgcacgcggcccaactgccgcgtccccttcgcc
accttcctggagcacgccaagctggtgaccttcgtggagggcgcctccatcgacgagcgc
agcgtccggttcatgacccggctgctggagcgctcggggctcggggaggagacctgcctg
cccccggcccaccactacatcccgccgtaccggaacatggaggcgtcgcgcgcggaggtg
gagctggtcatcttctccgccatcgacgacctgctcgccaagacggggctcagccctggc
gccatcgacatcctcgtcgtcaactgcagcctcttcgcgcccgtgccgtccttcaccgac
atgatcatccgccggtacgggatgcgggaggacatccggaacgtgcacctgtccgggatg
gggtgcagcgcggggctcatctccgtggggctggcgcgcaacctcctgcaggtggcgccc
cggggcgcgcacgcgctcgtcgtgtccacggagaccatcacgcccaactactacgtgggc
aaggagcgcgccatgctcctgcccaactgcctcttccgcatgggcggcgccgccgcgctg
ctgtcgacgtcgcgcgcccgggcgcggttccgcctcgcccgcgtggtgcgcacgctgacg
ggcgccggcgacagcgcgtaccggtgcgtgttccaggaggaggacggcgagggccaccgc
gggatcaacctgtccaaggacctgatggccatcgccggggacgcgctcaaggccaacatc
accgccatcggcccgctggtgctgccggcgtcggagcagctgctgttcgcgctctccttc
atcgcgcgccgcgtgctcagcgaccgccgcgtcaagccgtacctgcccgacttccgcacg
gcgttcgagcacttctgcatccacgcgggcggccgcgccgtcatcgacgagctgcagcgc
agcctggggctgtcggaccaggacgtcgaggcgtcgcggatggcgctgcaccggttcggc
aacacgtccagcagctcggtctggtacgagctcgcctacatcgaggccaagggccggatg
aggaagggcgaccgcgtgtggatgatcggcttcgggtccgggttcaagtgcaacagcgcg
gcgtgggagtgcatcgcgccggcgcgcaccgccgaggggccctgggaggacagcatctgc
cgctaccccgtcgacatcccggaggtgctcaagcactag
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