Panicum virgatum (switchgrass): 120704672
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Entry
120704672 CDS
T07260
Name
(RefSeq) MYB-like transcription factor ODO1
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120704672
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120704672
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
120704672
NCBI-ProteinID:
XP_039845085
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Position
4K:complement(9014591..9016428)
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AA seq
288 aa
AA seq
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MGRQPCCDKVGVKKGPWTAEEDQKLVGFLLTHGHCCWRVVPKLAGLLRCGKSCRLRWTNY
LRPDLKRGLLSDDEERLVIDLHARLGNRWSKIAAQLPGRTDNEIKNHWNTHIRKKLVRMG
IDPVTHLPLQEAPAAAAPGEQESHLPPPPAPQQEHQPPSDGGLVLQEDDAGEEDLPMIQA
HEITTVPPAAPTAPAASNCGSVSSASASGGSASVVSPSCSSSASASAVSGVEATEWPEPL
YLFGTDGIMDAAWDDLFPVTGGGGGGMGGVDPFDGYPGGGFDQDDDSM
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggggaggcagccgtgctgcgacaaggtgggcgtgaagaagggcccgtggacggcggag
gaggaccagaagctcgtcggcttcctcctcacccacggccactgctgctggcgcgtcgtc
cccaagctcgcagggctgctgaggtgcgggaagagctgccggctccggtggaccaactac
ctgaggcccgacctcaagaggggcctcctctccgacgacgaggagcggctcgtcatcgac
ctccacgcgcggctcgggaacaggtggtccaagatcgcggcgcagctgcccgggaggacg
gacaacgagatcaagaaccactggaacacccacatccggaagaagctcgtccggatgggg
atcgaccccgtcacccacctcccgttgcaggaggcccccgccgctgctgctcccggagag
caggagagccacctgcctccgccgccggcgccgcagcaggagcaccagcctcctagcgat
ggcgggttggtgctgcaggaggacgacgcgggcgaggaggacctgccgatgatccaggcg
cacgagatcaccacggtgccaccggcggcgccaaccgcgccggcggcgagcaactgcggc
tcggtttcttctgcctccgcctccggcggctccgcgtccgtggtctcgccgtcctgctcc
tcctcggcctcggcctcggcggtgtccggcgtggaggcgacggagtggccggagcccctg
tacctgttcggcacggacggcatcatggacgccgcctgggacgacctcttccccgtcacc
ggcggcggcggcggcggcatgggcggcgtggacccgttcgacggctacccgggcggcggc
ttcgaccaagacgacgactcgatgtga
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