Panicum virgatum (switchgrass): 120704746
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Entry
120704746 CDS
T07260
Name
(RefSeq) putative E3 ubiquitin-protein ligase UBR7
KO
K11979
E3 ubiquitin-protein ligase UBR7 [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120704746
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120704746
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
120704746
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-UBR
PHD
PuR_N
EF-hand_7
FAM184
PHD_ash2p_like
Motif
Other DBs
NCBI-GeneID:
120704746
NCBI-ProteinID:
XP_039845189
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Position
4K:29533816..29541480
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AA seq
416 aa
AA seq
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MADTARDGGDAFADEAEPTVTIDEYIEGIEAEELEADLVLGGDDGKECTYAGGYLKRQAV
FSCLTCVPDGVAGVCTACSLACHDGHEIVELWTKRKFRCDCGNSKFGGHLCKLCPEKDSE
NPENCYNHNFKGSYCTCGRPYPDPEAKEQVEMIQCCICEDWFHEDHIGLNSIEEIPRDEE
GEPLYEDFICHKCSPVCYFLKLYPQTIWASSKQDLASQTNTNDSTVMEGGPSDHANIEKH
ENGALVDQMGGEKTSMENGSIKDIAVPEKANLEDSSGNNCKLGTDVNTMPDGTEKNMPFF
MSKGWRNTLCRCLTCTNFYAQRGIAYLVDKEDSIEEYEKIAKQKREKKLEQQEGAETNFL
NSLNHVQKIEMLSGINDMKNEFQSFLESFDSSKPVTSEDVRSVFENLAKKKKQRLS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacggcgcgcgacggcggggacgccttcgcggacgaggcggagcccacggtc
accatcgacgagtacatcgagggcatcgaggccgaggagctggaggcggatttggtgctg
ggcggcgacgacggcaaggagtgcacctacgccggcgggtacctcaagcgccaggctgtc
ttctcctgcctcacctgcgtgccggatggagtcgccggggtgtgcaccgcctgcagcctc
gcctgccacgatggacatgagattgttgaactttggacaaagagaaagtttcgttgtgac
tgtggcaactcaaagtttggtggccacctctgcaagctctgccctgagaaagattctgag
aatccagaaaattgttataaccataactttaaaggttcctattgcacatgtggaaggcct
tatccagatccagaagctaaggagcaagttgaaatgatacaatgctgtatttgcgaggac
tggtttcatgaggatcatattggtcttaactctattgaagagataccgcgagatgaggaa
ggggaaccactctatgaagatttcatatgccataaatgctcacctgtttgttatttcttg
aagctgtatcctcaaacaatttgggcttctagtaagcaggatttggcatcacaaactaac
acaaatgattcaactgtgatggaaggaggaccttcggatcatgctaacattgagaaacat
gaaaatggtgctcttgttgatcaaatgggtggcgagaagacctccatggaaaatggttct
ataaaagatattgcagttcctgagaaggccaatttggaggacagttctggaaacaactgc
aagctaggaacagatgtaaatacaatgccagatggcacagaaaaaaatatgccctttttc
atgtctaaaggctggaggaacacactatgtaggtgcctaacatgcactaacttctatgca
caacgaggtattgcatatcttgttgacaaggaggactctattgaggagtatgagaagatt
gccaagcagaagagggagaagaagttggaacagcaggaaggagctgagacgaactttcta
aattctcttaaccatgttcagaagatagagatgttgagtggcattaatgacatgaagaat
gagtttcagtcctttctggaatcttttgactcgtcaaaaccagtcacatcagaagatgtc
cgctcagttttcgagaatctggctaagaagaagaaacagaggttatcttag
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