Panicum virgatum (switchgrass): 120704806
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Entry
120704806 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120704806
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120704806
Membrane trafficking [BR:
pvir04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
120704806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ysc84
FYVE
Motif
Other DBs
NCBI-GeneID:
120704806
NCBI-ProteinID:
XP_039845265
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Position
4K:complement(33584681..33589593)
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AA seq
538 aa
AA seq
DB search
MAETALLYPPIEPYDLEPPQVPAGGGGGEEKARASDRPVMWDEEPDASPAPEAGPHIFEP
EAKDHTSRNFKEGSLDVVNACEFRDEMTTSKESRENIYASFSLCEQTGIWVPASVPPMTK
HDHEEWQKGFGYNSGCFPEEEYQWDIDEENLEMTMWDVLSEMIIAGKDKILSIASFDLGR
YGMSMVSDFFLEEALKDKAQTLEDISAGSEHALLETEPTKWLPDSAAPSCMLCGARFHPI
ICTRHHCRFCGGIFCGGCSKGRSLMPPKFMNSDPQRVCDVCGVRLECIQPYLMNQFSRAC
QLPTQDLTDLSTLRSWINIPWAIKLEYEIYKAANSIYGYCKVGDLKAEKSIPDSILREAK
GLAIITEVKVGMMLTYKIGTGLVVARRADGSWSPPSAISTCGLGYGIQAGGELADYIIVL
RNTDAIKTFSGNAHMSIGAGISASAGHLGRAAEADFRAGDGGYAACYTYSCSKGAFVGCA
LNGSVVSTRDSVNARFYGGPVKASEILLGSLPRPPAAATLYKALSILYDKIKKETTCL
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaactgctctcctctaccctcccatcgagccgtacgacttggagcccccgcag
gtgcctgccgggggcggcggcggcgaggagaaggctagggcttccgaccggccggtgatg
tgggacgaggagcccgacgcgtcgcccgcccctgaagcgggcccccacatatttgagcca
gaagcaaaggatcatacttcaagaaatttcaaggaaggaagccttgatgttgtcaatgct
tgtgagttcagagatgagatgacaacctcgaaggaatctagagaaaacatatatgctagt
ttctcactttgtgagcaaacaggcatatgggtgcctgcttctgttccaccaatgacaaaa
catgatcatgaggagtggcaaaaggggttcggttataatagtggatgcttcccagaagaa
gaatatcagtgggatattgatgaagaaaatttggagatgacaatgtgggatgtactttct
gagatgatcattgcaggaaaagataaaatattatctattgcgtcatttgatcttgggagg
tatggcatgtcgatggtttcagattttttccttgaggaggctttgaaagataaggctcaa
acactagaagatatcagtgctggttctgaacatgctctccttgagacagaaccaacaaag
tggttgcctgatagtgctgccccttcttgcatgctttgtggagcacgttttcatccaata
atttgcactcggcatcactgccgattttgtggtgggatattttgtggtggctgttcaaag
ggtagaagcttgatgcccccgaaattcatgaattcagatcctcaaagggtatgtgatgtt
tgtggagtgcgtcttgagtgtatccagccttatttaatgaatcaattcagtcgtgcttgt
caacttccaactcaagacttgacagacctgagcaccttgaggtcatggataaacatccca
tgggcaatcaaattggagtatgagatctacaaagctgcaaattccatctacggctattgt
aaggtaggagatcttaaagctgagaagtcaatccctgattcaattctcagagaagcaaaa
gggcttgcaataatcactgaggtaaaggtgggaatgatgcttacatacaaaattggtact
ggactagtggttgctcgcagagctgatggttcttggtcccctccttctgccatctctact
tgcggtcttggatatggaattcaggctggaggcgagttagctgactacattattgttctt
aggaacacagatgccatcaaaactttcagtggaaatgcacatatgtcaattggggctggt
attagtgcttctgctggtcatcttggacgagcggcagaggctgatttccgtgctggtgat
ggtggttatgctgcatgttacacatatagttgtagcaaaggtgcctttgtgggctgcgca
ctgaatggaagtgtggtatccactcgagactcggtaaatgctcgattctatggcggccca
gttaaggcatcagaaatccttcttggctcgctgcccaggccacctgctgctgccactcta
tacaaagctttatccatattatacgataagatcaaaaaggaaaccacttgtctttag
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