Panicum virgatum (switchgrass): 120704838
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Entry
120704838 CDS
T07260
Name
(RefSeq) eukaryotic translation initiation factor 2D-like
KO
K15027
translation initiation factor 2D
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pvir03012
]
120704838
Translation factors [BR:
pvir03012
]
Eukaryotic type
Initiation factors
eIF-2D
120704838
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Gene cluster
GFIT
Motif
Pfam:
SUI1
Pre-PUA
PUA
Motif
Other DBs
NCBI-GeneID:
120704838
NCBI-ProteinID:
XP_039845306
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Position
1K:35997715..36002745
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AA seq
596 aa
AA seq
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MFKKPVDVKTVQRLSGADKKKLRRTAKERFPQASDADLDAILPPKGEITLAKYPNHALVY
AIEGEFPMIFNIDARGHDLFPTVYALWKVPHLLPAFTLKGGEVSRYVIGGADLMFPGISI
PPEGFPSFGAGQPWAVKVPGNPAPIAVGITTMSSTEALKAGLRGKALRILHYYRDMLWDS
ADGRYVPNEGFFEDIVVEDPNFVSTSQSPDSAEGTPEVTHESEDAAIDSSDTADPGVHNE
AKEEITDGINELKLPEDKSAEQAPDEKEHQTLTTEEIDSLLDKCLLQALYTSIKEKDLPM
PGSTLWSNHILPCRPPGVTLDIKKSSHKKLSKWLQSKSSSGLISAKEDKYKKEVILLGIN
RKHPDYMAFKPEKRVQEPVEQEKAVAESSVTKQLEVAEIYKPSSHVKPIFMAVEADMEKY
YSASEASDVVFRYVEKENLVKPTDKAKVILDVTLCDALYKGAIKKGSAYPTEIHKKDLGS
TLLNRMQVHHKVTRGTQEVIRKGAIRTIQIMTERRQGNKKMTRLSGLECFLMDPDSLASE
LQKKFACSTTTAELPGKKGQYEVLVQGGVIDDLAKHLVDHYGVPKRYIEVYDKTKR
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagaaaccagttgatgtgaaaactgtacagcgcttgtctggggcagacaaaaag
aagttaagaagaactgccaaggaaaggtttccacaggcatctgatgctgatcttgatgcc
attcttcctcccaagggtgagataacactagctaagtacccaaatcatgctcttgtatat
gccatagagggggagttcccaatgatcttcaacattgatgcaagaggccacgatctgttt
ccaacagtttatgcactctggaaggtccctcatctgttgccagcttttacgcttaagggt
ggtgaggtttcacgttatgtgattggtggtgctgatctgatgtttcctggtatcagcata
cccccagaagggtttccttcttttggagctggtcaaccatgggcagtaaaagttcccggt
aaccctgcgccaattgctgttgggatcacaactatgagtagtactgaagccttaaaggca
gggctacggggcaaggctttaaggattctacattactacagggatatgttatgggattca
gctgatggtcgttatgtccctaatgaaggattttttgaagacattgttgttgaagatcca
aattttgtttcaacatctcaatctcctgattctgctgaaggaactccagaagtcacacat
gaaagtgaagatgcagcaattgatagttcagacactgctgatcctggcgtccacaatgaa
gctaaagaagagataactgatggtataaatgaactcaaactgcctgaagataaatcagcc
gaacaggcacctgatgaaaaggaacatcagactttgacaactgaagaaattgattctctt
ttggacaaatgccttctgcaagcactgtacacaagcataaaagaaaaagaccttcccatg
ccaggaagtacactatggtcaaatcacatactcccctgcaggcctccaggtgttactctt
gatattaaaaagtcatcacacaagaaactatccaagtggttgcaatcaaaatcttcatct
ggcctaatttcagcaaaagaggacaagtataagaaggaagttatattgctaggtatcaac
cgtaagcatccagactacatggcctttaaaccggaaaagagagtacaggagcctgtcgaa
caggaaaaggctgttgctgaaagtagtgtcacaaagcaattggaagttgctgagatttat
aagccaagttctcatgttaaacccatatttatggctgtcgaagctgacatggagaagtat
tacagtgcatcagaggcttctgatgtagttttcaggtacgtcgaaaaggaaaatttggtt
aagcctacagacaaggccaaagtgattcttgatgttacattatgtgatgcattgtacaaa
ggagctatcaagaagggttcagcatatccaactgagatccacaagaaggatttgggatca
acacttttaaaccgcatgcaagttcaccataaagtaacaagaggaactcaggaggtcata
cgcaagggtgccataagaactattcagatcatgacagaaagaaggcagggaaacaagaag
atgactcggctttctggactggaatgctttctaatggatcctgattccttggcgtctgaa
ctgcagaagaaatttgcttgcagcaccaccaccgctgagcttccaggtaagaagggccag
tacgaggtcttagttcaaggtggagtgattgatgatcttgcaaagcaccttgtcgaccat
tacggtgtcccaaagagatacattgaggtttatgacaaaacaaagaggtag
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