Panicum virgatum (switchgrass): 120704841
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Entry
120704841 CDS
T07260
Name
(RefSeq) LRR receptor-like serine/threonine-protein kinase HSL2
KO
K00924
receptor protein kinase TMK [EC:
2.7.11.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120704841
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120704841
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120704841
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: TKL group
IRAK family
120704841
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_1
Pkinase
PK_Tyr_Ser-Thr
LRR_8
LRR_4
LRR_14
LRRNT_2
LRR_LRWD1
LRR_R13L1-DRL21
LRR_ComC
Kinase-like
LapA_dom
Motif
Other DBs
NCBI-GeneID:
120704841
NCBI-ProteinID:
XP_039845307
LinkDB
All DBs
Position
4K:complement(34237214..34240731)
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AA seq
995 aa
AA seq
DB search
MSPSNTTCLSLLPVVLLLLVVAGGRSSQRAAATSNREALLAVKRKWGGPPQLASWDPAAA
PDHCNWTGVTCATGAGGGAVTGITLSGFSLTGSVPAPVCALKNLTRLDLAYNNLTGAFPA
AALHACAALRFLDLSNNQFSGPLPRDIDGLSPAMELLNLSVNRFDGEVPPAVARLPALKS
LLLDTNRFTGAYPAAEISQLAGLEVLTLADNAFAPAPVPAEFARLTNLTYLWMDNMNLTG
EIPEAFSSLTELTVFSLASNELTGEIPAWVLQHANLQKIYLFSNNLSGELPRNVTAMRLV
ELDVSTNQLTGEMPEALGDLKNLAFLSLYKNKFTGAIPASIGLLPRLGDIRIQDNRFSGE
LPPELGKHSPLGNLDVGNNNLSGPLPEGLCANGTLYNIDAFNNSFSGEFPAQLGDCATIN
NLMLYNNRFSGEFPARIWSFPKLTTVMIQNNSFTGTLPSEISFNISRIEMGYNMFSGSVP
TSATGLLTFLAEHNRLAGELPSDMIKLANLTDFSVPGNQITGSIPTSINLLQKLNSLNLS
GNQISGMIPPGSIGLLRALTILDLSGNELAGGIPSDMGQLHLTSLNMSLNRFTGEVPPSL
QIPAYSRSFLGNGHLCVSAADSGTNLPTCRDGGARGELSRVLIILFSLLGGAVLMGCVGV
AWLLLRRRRESHEVTDWKMTAFTQLDFTESDVLSNIREESVIGSGGSGKVYRIHLGGGEE
GGRTVAVKKIWSSRKVDEKLDREFESEVKVLGSIRHTNIVKLLCCISSQEAKLLVYEYME
NGSLDRWLHHRDRAGAPAPLDWPTRLAVAVDAARGLSYMHHDCAQPIVHRDVKSSNILLD
PDFQAKIADFGLARILAKSGEPESVSAIGGTFGYMPPEYGYRSRVSEKVDVYSFGVVLLE
LTTGKVANDTGAELCLAEWAWRRYQEGPPLDDVVDVEIRGDAACLQDVLSVFTLGVICTG
EEPRARPSMKDVLHQLARCCRVPMPTEAENCSSVE
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgtcgaacaccacctgcctctctctgctccccgtcgtcttgctcctcctcgtc
gtcgcgggcgggcgcagctcccagcgcgccgccgccaccagcaaccgcgaggcgctgctc
gccgtcaagaggaaatggggcggaccaccgcagctcgcgtcctgggaccccgccgccgcc
cccgaccactgcaactggaccggcgtcacctgcgccaccggcgccggcggcggggccgtc
acgggaatcaccctgtccggcttcagcctcaccggctccgttccggcgcccgtgtgcgcg
ctcaagaacctcacccgcctcgacctcgcctacaacaacctcaccggcgccttccccgcc
gccgcgctccatgcctgcgcggcgctccgcttcctcgacctctccaacaaccagttctcg
ggtcccctcccgcgcgacatcgacggcctctcgccggcgatggagctcctcaacctctcc
gtcaaccgcttcgacggcgaggtgccgcccgcggtggcgcggctgccggcgctcaagtcc
ctgctcctcgacaccaaccgcttcacgggcgcgtacccggcggccgagataagccagctc
gccgggctcgaggtcctcacgctggccgacaacgcgttcgcgccggcgcccgtgcccgcg
gagttcgccaggctcaccaacctcacctacctctggatggacaacatgaacctcaccggc
gagatcccggaggccttctccagcctcacggagctcacggtgttctccttggcatccaac
gagctcaccggcgagatcccggcctgggtgctgcagcacgcgaaccttcagaagatctac
ctgttcagtaacaacctctccggcgagctgccgcgcaacgtcacggcgatgcgcttggtg
gagttggacgtgtcgacgaatcagctcaccggggagatgccggaagccttgggcgacctc
aagaacctcgccttcctatctctctacaaaaacaagttcaccggcgcgatcccggcgagc
atcgggctgctaccgcggctcggagacatccggatacaggacaaccggttctccggcgag
ctcccgccggagctcgggaagcactctccgcttggcaacctcgatgtgggcaacaacaat
ctctccggcccgctgccggaggggctctgcgccaacggaacgctctacaacatcgacgcc
ttcaacaacagcttctccggcgagttcccggcgcagctcggcgactgcgccacgataaac
aacctcatgctctacaacaaccgcttctccggcgaattcccggcgaggatatggtccttc
ccgaagctgaccacggtgatgatccagaacaacagcttcaccggcacgctgccgtcagag
atctccttcaacatctcacggatcgagatgggatacaacatgttctcgggatccgtcccg
acgtcggcaactgggctgctcactttcctggcggagcacaaccggcttgccggggaattg
ccgtctgacatgatcaagctcgccaatcttaccgatttctcggtgcccggcaaccagatc
actggctccattccaacatcgatcaacctgctgcagaagctcaattccctcaatctgagc
ggcaaccagatatccggcatgataccgccggggagcattgggctgctccgggcgctgacg
atcctcgatctgtccggcaacgagctcgccggcggcataccgtcggacatgggccagctg
cacttgacctcgctcaacatgtcgctgaaccggttcaccggcgaggtgccgccgtcgctg
cagatcccagcttacagccggagcttcctcggcaatggccatctatgcgtcagcgcggcg
gactcgggcacaaacctcccgacgtgccgggacggcggcgcccgcggcgagctgtcgcgg
gtcctgatcatcctcttctcgttgctcggcggcgccgtcttgatgggctgcgtgggcgtc
gcgtggctgctcctccggcgccggagggagagccacgaggtgacggactggaagatgacg
gccttcacccagctggacttcaccgagtcggacgtgctgagcaacatccgcgaggagagc
gtgatcggcagcggcgggtccgggaaggtgtaccgcatccacctcggcggcggcgaggag
ggcggccggacggtggccgtgaagaagatctggagctcgaggaaggtggacgagaagctg
gacagggagttcgagtcggaggtgaaggtgctgggcagcatccgccacaccaacatcgtc
aagctgctctgctgcatctccagccaggaggccaagctgctggtctacgagtacatggag
aacggcagcctcgaccggtggctccaccaccgggaccgcgccggcgcgccggcgccgctg
gactggccgacgaggctggccgtcgccgtcgacgccgcccgggggctcagctacatgcac
cacgactgcgcgcagcccatcgtgcaccgcgacgtcaagtccagcaacatcctgctcgac
ccggacttccaggcgaagatcgccgacttcggcctcgcccggatcctcgccaagtccggc
gagccggagtccgtgtcggccatcggcggcacgttcgggtacatgcctccagaatacggg
tacaggtcaagggtgagcgagaaggtggacgtgtacagcttcggcgtcgtcctgctggag
ctgacgaccggcaaggtcgccaacgacaccggcgccgagctgtgcctggcagagtgggcg
tggcggcggtaccaggaaggccctccgttggacgacgtcgtcgacgtcgagatccggggc
gacgcggcctgcctgcaggacgtcttgtccgtgttcacgctcggcgtgatttgcaccggg
gaggaaccccgggcgcggccgtccatgaaggatgtcctgcaccaactcgcgcggtgctgc
cgggtgcccatgcccacagaggcggagaactgcagtagtgtggagtag
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