Panicum virgatum (switchgrass): 120704845
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Entry
120704845 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 52-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120704845
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120704845
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Gene cluster
GFIT
Motif
Pfam:
MatE
Lamp2_2nd
Motif
Other DBs
NCBI-GeneID:
120704845
NCBI-ProteinID:
XP_039845311
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Position
4K:complement(34359626..34361848)
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AA seq
557 aa
AA seq
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MCTTTPMPPAPPVALGGGKGGHHVYVTVPQRAEGDAAGHCGRELKCGAVPLPAPGETVRE
AAALCRLAFPIALTALLLYSRTALSMLFLGSIGDLPLAAGSLAVAFANITGYSVLSGLSL
GMDPLCSQAFGANQPRLLGLTLYRSVLFLLCCSLPLSALWLNMSKILVFLGQDREITALA
QEYILFSLPDLFSFSIIHPLRVYLRSQGITRPLAAAAGAAVLFHVPANYVLVGRLGLGAP
GVAAAASASNFVLLAVLLAYVVGRRDAAAALLAAGPPTAEWLAGWAPLARLAAPSCVSVC
LEWWWYEVMILLCGLLPDPKPAVASMGVLMQTTALVYVFPSSLGFGVSTRVGNELGANRP
GRARAAAHVAVAGAAGMGLAAMSFAAGVRHAWGRMFTADADILRLTAAALPIVGLCELGN
CPQTVGCGVLRGSARPARAAHVNLGAFYLVGMPVAVLLAFGLGVGFVGLWMGLLAAQVCC
AGLMLCVVGSTDWDAQALRAQELTSCSPADVERSGAHRSATAAGEGGRPEKGEQAGMERK
CYQPLISNSEETMPETV
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaccaccacccccatgccaccggcgccgccggtggcgctgggcggcggcaagggc
ggccaccacgtctacgtcacggtgccccagcgcgcggaaggcgacgcggccggccattgc
ggccgcgagctcaagtgcggagccgtgcccctgccggcgcccggggagaccgtccgggag
gcggcggcgctgtgccggctcgcgttcccgatcgcgctgacggcgctgctgctctactcg
cggacggccctgtcgatgctcttcctgggctccatcggcgacctcccgctggcggccggg
tccctcgccgtcgccttcgccaacatcaccggctactcggtgctgtccgggctctcgctc
ggcatggacccgctctgctcccaggcgttcggcgccaaccagccgcgcctgctcggcctc
accctctaccgctccgtcctcttcctgctctgctgctcgctgccgctctccgcgctctgg
ctcaacatgtccaagatcctcgtgttcctgggccaggaccgcgagatcacggcgctcgcc
caggagtacatcctcttctccctcccggacctcttctccttctccatcatccacccgctc
cgcgtgtacctccgatcccaggggatcacgcgcccgctcgccgccgccgccggcgccgcc
gtgctgttccacgtgccggcgaactacgtgctggtggggcgactcgggctcggcgcgccc
ggcgtggccgccgcggcgtcggcgtccaacttcgtgctcctggccgtgctgctcgcgtac
gtcgtcggccggcgcgacgcggcggcggcgctgctcgcggcggggccgccaacggcggag
tggctcgccgggtgggccccgctcgcgcggctggccgcgccgagctgcgtgtcggtgtgc
ctggagtggtggtggtacgaggtgatgatcctgctctgcggcctcctaccggacccgaag
ccggcggtggcgtccatgggcgtgctgatgcagacgacggcgctggtgtacgtgttcccc
tcgtcgctgggcttcggcgtgtccacgcgggtgggcaacgagctgggcgccaaccgcccg
ggacgcgcgcgcgcggcggcgcacgtcgccgtggccggcgcggcgggcatggggctcgcg
gccatgtcgttcgcggccggggtgcgccacgcgtgggggcgcatgttcaccgccgacgcc
gacatcctccggctgacggcggccgcgctcccgatcgtggggctctgcgagctcggcaac
tgcccgcagaccgtcggctgcggcgtgctccgcggcagcgcgcggccggcgcgcgccgcg
cacgtcaacctcggcgccttctacctggtgggcatgccggtggccgtgctcctggcgttt
gggctcggcgtgggcttcgtcgggctctggatgggcctcctggcggcgcaggtgtgctgc
gccgggctcatgctctgcgtcgtcggctccaccgactgggatgcgcaggcgctgcgggcg
caggagctgacgtcatgctcgccggccgacgtggagaggtccggggcccacaggtcagcg
acggccgcgggagagggaggcaggccggagaagggggagcaggcaggcatggagcggaag
tgctaccagccattgatctccaacagtgaggagaccatgcctgaaactgtgtag
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