Panicum virgatum (switchgrass): 120704855
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Entry
120704855 CDS
T07260
Name
(RefSeq) auxin response factor 7-like
KO
K14486
auxin response factor
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120704855
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Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
120704855
NCBI-ProteinID:
XP_039845325
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Position
1K:complement(36020824..36027109)
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AA seq
672 aa
AA seq
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MANAGAAVGPGGASDALFRELWHACAGPLVMVPRQGELVYYFPQGHMEQLEASTDQQLDQ
HLPLFNLPSKILCKVVNVELRAETDSDEVYAQIMLQPEADQNEPTGPDPEPPEPERCNVH
SFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHIFRG
QPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGDNGELRVGVRRLMRQLNNMPSSVISSHSM
HLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNHKMSVGMRFKMRFEGDE
SPERRFSGTIIGLGSMPANSTSPWADSDWRSLKVQWDEPSAVVRPDRVSPWELEPLDATN
TQPPQPPLRNKRARPPASPSIAPELPPAFGFWKSPAEPTHAFSFSGLQRTQELYHSNPNS
IFSSSLNVGFNSKNEHSTPTNNHLYWPIRDTRTESYSASINKLLPERKQESATAGCRLFG
IEISNAVSPVVTVASVGQDQPPVESVDVESDQLSQPSQANKTDAPAASSERSPHETESRQ
VRSCTKVIMQGMAVGRAVDLTRLEGYDDLLHKLEEMFDIQGELSASLKKWKVIYTDDEDD
MMLVGDDPWPEFCSMVKRIYIYSYEEAKSLTPKAKLPVIGDTTKPNPDKLSPESDMPQSD
SNNSALVAADKD
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgccggcgcggccgtcggtccagggggtgctagcgatgctttgttcagggaa
ctctggcatgcttgtgctgggccgttggtcatggtgcctcgccaaggcgagctggtttac
tacttcccgcaaggtcatatggaacagcttgaagcatctacagatcagcaacttgaccag
cacttacctttgtttaatctaccatccaagatcctgtgcaaagtggtaaatgtagaactc
agagctgaaactgattccgatgaagtttatgctcaaattatgctgcaaccagaagcagat
caaaatgagcccactggcccagatcctgagccaccagagccagaaaggtgcaatgtccat
tccttctgcaagactttgactgcttcagacacgagcacccatggtggtttctctgtcctc
aggagacatgctgaagaatgtttgccccaattggatatgactcagaatccaccatggcaa
gaactggtggctaaagatctccatggaaatgaatggcatttccgtcacatctttcgaggt
caaccaaggaggcatctacttacaacaggctggagtgtttttgttagctcaaaaagattg
gttgctggtgatgcatttatctttttgagaggtgataatggagagctacgagtcggggta
agaaggctcatgaggcaactaaataacatgccatcatcagttatctcaagccatagcatg
catcttggagtcctcgcaactgcatctcatgccatctccactggaactctcttttctgtt
ttctacaaacccagaacaagtcgatcggagtttgttgtgagcgtaaacaagtaccttgaa
gctaagaatcacaagatgtctgtcggtatgaggtttaaaatgagatttgagggtgatgaa
tctcctgaaagaagatttagtgggacaattattggtctgggaagcatgccagctaactca
acatctccgtgggctgactctgattggagatctttgaaggtccaatgggatgagccttct
gctgttgtccgtccagatagagtttcaccatgggaactagaaccccttgatgcaactaac
acacaaccgcctcagcctcctttacggaataagcgtgcacggcctcctgcttcaccttct
attgctccagaacttcctccagcttttggtttttggaaatccccagctgagcctacccat
gctttctcattttcgggactgcagcgaactcaggaattataccattcaaaccccaattca
atcttttcatcatcgttgaatgtgggatttaattcaaagaatgaacattctactccaacc
aacaatcatttgtactggccaattcgagacactagaacggaatcctactctgctagcatt
aacaaacttctacctgaaaggaagcaagaatccgctactgctggctgcagattgtttggt
attgagataagtaatgcagtatcaccagtggttactgttgctagtgttggtcaagaccag
ccacctgttgagtcagtagatgttgagtctgatcagctgtcacagccatcccaagccaac
aaaacagatgctccagcagcaagcagtgagcgctctcctcatgagactgagagccggcaa
gtcaggagctgcaccaaggtaatcatgcaaggaatggcggttggcagggcagtggacttg
acgaggctagaaggatatgatgatcttctccacaagttggaggagatgtttgatatccag
ggggagctttctgctagcctcaagaaatggaaggttatttacacggatgatgaggatgat
atgatgctggtcggggatgatccgtggcctgaattttgcagcatggtgaaaaggatatac
atttactcctatgaggaggccaagtctttgactcccaaggcgaagctgccggtcattggt
gataccactaaaccgaacccagacaagttgtcaccggaatctgacatgccgcagagtgac
tcaaacaacagcgctctggttgctgccgataaggactga
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