Panicum virgatum (switchgrass): 120704885
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Entry
120704885 CDS
T07260
Name
(RefSeq) putative heat stress transcription factor A-6a
KO
K09419
heat shock transcription factor, other eukaryote
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120704885
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
120704885
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GFIT
Motif
Pfam:
HSF_DNA-bind
Caldesmon
DUF5401
KIF21A
Motif
Other DBs
NCBI-GeneID:
120704885
NCBI-ProteinID:
XP_039845358
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Position
4K:34996488..34998555
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AA seq
342 aa
AA seq
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MEHPAAVTVKQEEREDDEVVVVDAAGDVGGRAAAAPATEPWRTPPAASQVPPFLAKTFEL
VEDPATDGVVSWGAARNSFVVWDPHAFAAGLLPRRFKHANFSTFLRQLNTYGFRKVSPDN
WEFAHADFLAGQRHLLANIHRRRGAAPGGSTVPSGAKNGASGSGGRESELERLRRDREAL
ARELERLRRGQQDARAQLLDMERRVRGTERRQEQCTAFLARALGNPGFLERRGRAAPVEA
GRKRPLLDAAADVLAFMELALAASAEVEAAPVPAVAAASQGSSSTSTATDMIWYDLLGDE
QGEIDAEVEELVIEAAEPWEEMGDEEVEELVQQIGCLGSPSP
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggagcaccccgcggccgtgacggtcaagcaggaggagcgggaggacgacgaagtggtg
gtggtggacgccgccggcgacgtcggcgggcgagcagccgcggcgccggcgacggagccc
tggaggacaccgccggcggcatctcaggttccgccgttcctggcgaagacattcgagctg
gtggaggacccggcgactgacggcgtcgtgtcgtggggcgcggcgcggaacagcttcgtg
gtgtgggacccgcacgccttcgcggcggggctcctcccgcgccgcttcaagcacgccaac
ttctccaccttcctccgccagctcaacacctacggattccgcaaggtgagcccggacaac
tgggagttcgcgcatgccgacttcctcgctggccagcgccacctcctcgccaacatccac
cgccggcgcggcgccgcgccgggaggatccacagtgccatcgggcgcgaagaacggcgcg
agcgggagcggcggccgcgagagcgagctggagaggctgcggcgggaccgggaggcgctg
gcgcgggagctggagcggctgcggcgcgggcagcaggacgcccgcgcgcagctgctggac
atggagcgccgcgtgcggggcacggagcgccggcaggagcagtgcacggccttcctggcg
cgcgccctcgggaacccgggcttcctggagcgacgcggcagggcggcgcccgtggaggcc
ggcaggaagcggccgctgctcgacgccgcggcggacgtcctcgccttcatggagctggcg
ctggcggcgagcgccgaggtcgaggcggctcccgtcccggccgtggcagcggcgagccaa
ggctccagcagcacctccaccgccacggacatgatatggtacgacctgctcggggatgag
cagggggagatcgacgccgaggtggaggagcttgtcatcgaggcggccgagccgtgggag
gagatgggcgacgaggaggtggaggagctggtgcagcagattggctgcctaggctcgccg
agcccttga
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