Panicum virgatum (switchgrass): 120704917
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Entry
120704917 CDS
T07260
Name
(RefSeq) probable histidine kinase 1
Organism
pvir
Panicum virgatum (switchgrass)
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Gene cluster
GFIT
Motif
Pfam:
HATPase_c
Response_reg
HisKA
PAS_4
sCache_3_3
Cache_3-Cache_2
DUF4407
Motif
Other DBs
NCBI-GeneID:
120704917
NCBI-ProteinID:
XP_039845389
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Position
4K:42049343..42056646
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AA seq
971 aa
AA seq
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MGDEYLAEPENEVAQSMWPENIGDKHQRQFRMENFRKDQDAFKDFKFDQKPVHVDFQRLM
EMANSDKGVSHMQYFMKHWEYKRANAARLLEEELGLLSQQRKEIEQNKQQILEEQRFQDE
SYYAVKRHVPILDEVYEDEWKRPSKKNDELSRNREPKIDVDYDSVAYWKERATQLEKTLE
ESIQRERSLVEKLEENIKNLQSHTPAEEFSGMLKRADYFLHLVLQSAPIVIAHQDADLRY
RFIFNHYPTLADEDVIGKTDYEILSGEGIEEMNCVKREVMATGIATKREFAFNTPMFGAK
TFVTYIEPVFSKGGETIGVNYVAMDITDQVKRREKMADIRVREAIQNAKETELSRSLHIT
EETMRAKQMLATMSHEIRSPLSGVLSMAEILATTKLDKEQHQLLQVMLSSGDLVLQLIND
ILDLSKVESGAMKLESTTFRPREVVQHVLQTAAASLKKELTLEGCIGDDVPVEVIGDVLR
VRQILTNLISNAVKFTHEGKVGINLQVVHEQQPGCKMEHEKVHKRAYPGTPITTAAENSC
LSPRNCDKDTLNCSKHEDFVQNGVPTCENFREDHEREEVVWLRCDVYDTGIGIPEKSLPL
LFKRYMQASADHARKYGGTGLGLAICKQLVELMGGTLTIVSRENEGSTFTFVLPCKIPVK
EEHSDDPDEVHSSQNGFTNSDIEGSFLFKPQMRTSLLSTGVSVISNSKLFGAKLMCYDPP
DILDDRKPFSNGFTSKEQDFASCTSDAHQSNGASVRSTAEKQHDDEMVLELNSQAERVSS
SQGDTVSVSGSSCQKTGPYKILEAESLHKKSKCSPIGNKAKILLVEDNRVNIIVAKSMLE
QLGHGIDIVNNGMQAIRAVQHHQYDLILMDVHMPEMDGLQATKHIRSFESTGFWDASVKP
EDDLMIADPAISSDCTHAKRQGQRVPIIAMTANSFSESADECLAAGMDSYISKPVNFQNI
KECLQRYLPSQ
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgaatacctggccgaacctgagaatgaggttgcacaatcaatgtggcctgag
aatataggagataaacaccagagacagttcagaatggaaaattttaggaaggaccaagat
gcttttaaggattttaagttcgatcagaagcctgttcatgtggattttcagcggcttatg
gaaatggcaaattctgacaaaggtgtttctcatatgcaatactttatgaagcactgggaa
tataagagagccaatgctgctcggcttctggaggaagagcttggtcttctcagccaacag
aggaaagagatcgagcaaaacaagcaacaaatcttggaggagcaacggtttcaggatgag
agttattatgccgtaaagcggcatgtacctatactggatgaagtttacgaagatgaatgg
aagcgtccgagtaaaaagaatgatgaactttctcgtaatagagagcctaaaatagatgtg
gactatgatagtgttgcctattggaaagagagagcaactcagttagaaaaaacacttgag
gaaagcattcaaagggagcgttcgttggttgaaaaattagaagaaaatataaagaatcta
cagtcacacacaccagcagaggaattctctgggatgttaaaacgtgctgattacttcttg
cacttggttcttcaaagtgctcctattgttattgcccatcaggatgctgatttacggtac
cgtttcatttttaatcactatccaacacttgctgatgaggatgttattggtaagacagac
tatgagatattgtcaggtgagggcatagaagagatgaattgtgtcaagcgagaagttatg
gccactggaatagcaactaaaagagagtttgcatttaacacaccaatgtttggagcaaag
acatttgtgacatacatcgagccagttttcagcaaaggtggggaaacaattggtgtgaat
tatgttgcaatggacataacagatcaggtcaaaagaagagagaagatggcagacataagg
gtgagggaagctatccaaaatgccaaggaaacagaacttagcagatctcttcacataaca
gaggaaacaatgcgagcaaaacaaatgctagccaccatgtcccatgagatcagatctcca
ctttcaggtgttcttagcatggccgaaattcttgcaactaccaaactggataaagaacaa
caccagctgctacaagttatgttatcctctggagatcttgtattgcagctgatcaatgac
atccttgatctttcaaaagtggagtcaggggctatgaaactagaatctacgacgttcaga
ccgagggaagtagttcaacatgtactccaaactgctgcagcttctctgaagaaggaattg
acccttgaagggtgcataggtgatgatgtcccagtggaggtcattggtgatgttctaagg
gttcgacaaattctgaccaacttgatcagcaatgcagtcaagtttacacatgaagggaag
gttggcataaatcttcaggttgtgcatgagcaacaaccaggatgcaaaatggaacacgag
aaagttcataagcgagcttatcctggcaccccaattactactgcagcagaaaattcttgt
ctctctccaagaaattgtgataaagatacattgaactgctcgaagcatgaagattttgtt
cagaatggcgttccaacatgtgaaaacttcagggaggatcatgagagggaggaagtcgtt
tggcttcggtgtgatgtttatgacactggaataggaataccagagaagtcattaccattg
ctgtttaagaggtacatgcaagccagtgctgatcatgcaagaaaatatggtgggacaggg
cttggccttgcaatctgcaagcagttggtggagttgatgggtggtactctgactatagtc
agtagagagaatgaaggatcaacatttacatttgtgctgccttgcaaaatccctgtaaaa
gaggagcacagtgatgatccagatgaagtgcatagttctcagaatggtttcacgaacagt
gatatagaaggttccttccttttcaagccacaaatgcgaacttctctcctgtcgacagga
gtttcagtaataagcaactcaaagttattcggtgccaagcttatgtgctacgatccacct
gacatattggatgatcgcaaaccgttctcaaatggcttcacatcaaaggaacaggatttt
gcaagttgtacctctgatgctcaccagtcaaatggtgctagtgtaaggagcacagctgaa
aaacaacatgatgatgaaatggtccttgaactgaatagtcaagccgaacgtgtttccagt
tcccaaggagacacggtatctgtttcaggttctagctgtcagaaaacgggaccatacaaa
attctagaagcagaatcactccacaagaaatccaagtgttctccaattggcaacaaggca
aagatcctcctagttgaagataaccgggtcaacataatagtggcaaaatcaatgctggag
cagctgggacatggtatagatattgtaaataacgggatgcaagcaatccgtgcagttcag
catcatcaatatgatcttattctgatggatgttcacatgccagaaatggatggcctacaa
gccactaaacatatccgttcttttgagagcaccggcttttgggatgcttctgtgaagcct
gaggatgatctgatgatagctgaccctgctatttcatcagattgtacacatgcaaaaagg
caagggcagagggttcctataattgcgatgacagcaaattcattttctgagagtgccgat
gaatgccttgctgcaggcatggattcctacatatctaagcctgtgaactttcagaatata
aaagaatgcctgcagcggtatttgccatctcaatga
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