Panicum virgatum (switchgrass): 120704936
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Entry
120704936 CDS
T07260
Name
(RefSeq) alpha-amylase type A isozyme-like isoform X1
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120704936
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
120704936
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GFIT
Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
AMT4_dom_C
Glyco_hydro_70
Motif
Other DBs
NCBI-GeneID:
120704936
NCBI-ProteinID:
XP_039845404
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Position
4K:42246652..42250873
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AA seq
436 aa
AA seq
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MGSRHLCCLSTLLQLLLLLGLASGQVLFQAFNWESWKQSGGWYNHLMGKVDDIAAGGVTH
VWLPPPSHSVSGQGYMPGRLYDLDASKYGTAAELRSLIAAFHGKGVQAVADIVINHRCAD
YKDSRGIYCIFEGGTPDGRLDWGPHMICRDDAQYSDGTGNLDTGAGFAAAPDIDHLNIRV
RRELTEWLLWLKSDLGFDAWRLDFARGYSAAVAAAYINGTAPSLAVAEIWGDMAYGRDGR
PEYDQDAHRQALVDWVDAVGGAASAAAVFDFTTKGILNAAVEGELWRLIDPRGKAPGVIG
WWPAKAVTFVDNHDTGSTQAMWPFPADKVMQGYAYILTHPGNPCIFYDHFFDWGFKDEIA
ALVAVRKRNGITPASELTILEYDGDAYLAEIDGKVIVKIGSRYDVSALIPAGYQVVADGN
DYAVWEKGAGEQVSQA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggggagcaggcatctgtgctgcctgtcgaccctgctccagcttctcctcctcctgggg
ctcgcatccggacaggtcctgttccaggcgttcaactgggagtcgtggaagcagagcggc
gggtggtacaaccacctgatggggaaggtcgacgacatcgccgccggcggcgtcacgcac
gtctggctgccgccgccgtcgcactccgtctccggccaaggttacatgcccggtcgttta
tacgatctggacgcgtccaagtacgggacggcggcggagctcaggtccctgatcgccgcg
ttccacggcaagggcgtccaggcggtggcggacatcgtcatcaaccaccggtgcgccgac
tacaaggactcccgcggcatctactgcatcttcgagggcggcacgcccgacggccgcctg
gactggggcccccacatgatctgccgcgacgacgcccagtactcggacggcacgggcaac
ctcgacaccggcgccggctttgccgcggcgccggacatcgaccacctcaacattcgcgtc
cggcgcgagctcaccgagtggctgctctggctcaagtcggacctcggcttcgacgcctgg
cgcctcgacttcgccagggggtactccgccgcggtcgccgcagcgtacatcaacggcacg
gcgccgagcctcgccgtcgccgagatatggggcgacatggcgtacggccgggacggcagg
ccggagtatgaccaggacgcgcaccggcaggcgctggtggactgggtggacgcggtgggc
ggggcggcgtcggcggcggcggtgttcgacttcaccaccaaggggatcctgaacgccgcc
gtggagggcgagctgtggcggctcatcgacccgcgggggaaggcgccgggcgtgatcggg
tggtggccggccaaggccgtcactttcgtcgacaaccacgacaccggctcgacgcaggcc
atgtggccgttccccgccgacaaggtcatgcaaggctacgcctacatactcacgcaccca
ggcaacccgtgcattttctacgaccatttcttcgactgggggttcaaggacgagatcgcg
gcgctggtggcggtgcggaagcgcaacggcatcacgccggcgagtgagctgacgatcctc
gagtacgacggcgatgcctacttggcggagatcgacggcaaggtgatcgtgaagatcggt
tccaggtacgatgtcagcgcgctcatccccgcggggtaccaggtcgttgccgacggcaac
gactacgccgtctgggagaaaggcgccggcgaacaagtgtctcaagcctaa
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