Panicum virgatum (switchgrass): 120705127
Help
Entry
120705127 CDS
T07260
Name
(RefSeq) DNA repair protein XRCC3 homolog
KO
K10880
DNA-repair protein XRCC3
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120705127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvir03400
]
120705127
DNA repair and recombination proteins [BR:
pvir03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
120705127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
AAA_25
DnaB_C
ATPase
AAA_22
NACHT
AAA_16
Motif
Other DBs
NCBI-GeneID:
120705127
NCBI-ProteinID:
XP_039845574
LinkDB
All DBs
Position
1K:36358263..36359543
Genome browser
AA seq
296 aa
AA seq
DB search
MRPPAPRPPAASSSSSYSQREPRPENPLLLLPSCRAAKLSLGCPLLDRVLSGGLPASVTE
IAGESASGKTQLCLQLALLAPQSPLSASALFLHSDLPFPLHRLRGLAPKSRPDILDHVLV
AAAHSPTDLLSLLSRAQRLLAHPGRSPHRLPIRLIILDSIASLFRADFDASPADLKRRSA
LFFQISAKLKELAYRHQCVVVVTNQVVDVVEGDAGNTVAWSSGRRVSPALGIAWANCVNT
RLFLTREVDGASGIARRRMKVAFAPHLPERGCEFVIRRDGVFGVEPAGEVGAPVLG
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcggccgccggcgcctaggccccctgctgcctcctcctcgtcctcctacagccagcgc
gagccccgcccagagaacccgctcctcctcctcccttcctgccgcgctgccaagctctcc
ctcggctgccccctcctcgaccgcgtcctctccggcggcctccccgcctctgtcaccgag
atcgccggcgaatccgcctccggcaagacccagctgtgcctacagctcgccctcctcgcg
ccccagtccccgctctccgcctccgccctcttcctccactccgacctcccgttccccctt
caccgcctccgcggcctcgcccccaaatcccgccccgatatcctcgaccacgtcctcgtc
gccgccgcgcactcccccaccgacctcctctccctcctctcgcgcgcccagcgcctgctc
gcccaccccggccgctccccgcaccgcctccccatccgcctcatcatcctcgactccatc
gcctccctcttccgcgccgacttcgacgcctcaccggccgacctcaagcgccggtccgcg
ctcttcttccagatatccgccaagctcaaggagctggcctacaggcaccaatgcgtggtg
gtggtgaccaaccaggtcgtggacgtggtggagggcgacgccgggaacaccgtggcgtgg
tcgtcggggcgccgggtcagccctgcgctcgggattgcgtgggccaactgcgtcaacacg
cggctgttcctgacgcgggaagtggacggcgccagcgggatcgcgaggaggcggatgaag
gtagcgttcgcgccgcacctgccggagcgggggtgcgagtttgtgatacggagggacggc
gtgtttggcgtcgagccggcgggagaggtaggcgctcctgttcttggataa
DBGET
integrated database retrieval system