KEGG   Panicum virgatum (switchgrass): 120705208
Entry
120705208         CDS       T07260                                 
Name
(RefSeq) exopolygalacturonase-like
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00040  Pentose and glucuronate interconversions
pvir01100  Metabolic pathways
Module
pvir_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    120705208
Enzymes [BR:pvir01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     120705208
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim Beta_helix
Other DBs
NCBI-GeneID: 120705208
NCBI-ProteinID: XP_039845614
LinkDB
Position
4K:38661994..38663408
AA seq 414 aa
MAFPNNTVLRAIFLLVLVSVAHAGGKAKESSSAPAEGGGGSCDGGTCDITKMGATAGGKT
DCTKAVQEAWTSACGGTGKQKIMIPKGDFLVGPLNFTGPCKGDVTIQLDGNLLATTDLSQ
YKANWIEILRVDNLVITGKGKLDGQGPAVWGKNSCAKKYDCKILPNSLVLDFVNNGEVSG
ITLLNSKFFHMNVFQCKDMVIKDVTVTAPGDSPNTDGIHMGDSSGVTISNTVIGVGDDCI
SIGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDITVKDCTLKKSTNGLRIKAYED
AKSVLTASKIHYENIKMEDAANPIIIDMKYCPNKICTASGDSKVTVKDVSFKNVTGTSST
PEAVSLLCSDKIPCSGVTMDNVKVEYSGKNNKTMAVCNNAKGSSTGCLKELACL
NT seq 1245 nt   +upstreamnt  +downstreamnt
atggccttccccaacaacaccgtcctgagagccatcttcctccttgttcttgtcagcgtt
gcgcatgctggcgggaaggcgaaggagagctcgtccgctccggcagagggtggtggtgga
tcctgtgatggcgggacatgcgacatcaccaagatgggcgcgactgccggcggcaagacg
gattgcaccaaggctgtacaggaggcatggacgtcggcgtgtggcggcacagggaagcag
aagatcatgatccccaagggcgacttcctagtcgggccgctcaacttcacgggcccgtgc
aagggtgatgtgaccatccagctggatggaaatctgcttgcaaccacggacctcagccag
tacaaggctaactggatcgagatcctgcgcgtggacaacctagtgatcaccggcaagggc
aagctcgacgggcagggccccgctgtgtggggaaagaactcctgcgccaagaagtacgac
tgcaagatcctaccaaactcgctggttctggacttcgtgaacaatggcgaggtgtccggc
atcacgctgctcaactccaagttcttccacatgaacgtgttccagtgcaaggacatggtg
atcaaggacgtgacggtcacggcgccaggggacagtcccaacacggatggcatccacatg
ggtgactcgtccggggtcacaatcagcaacacggtcatcggtgtcggcgacgactgcatc
tccatcggcccgggtaccaccaaggtcaacatcaccggcgtcacctgcggcccgggacac
ggcatcagcatcggcagccttgggcggtacaaggatgagaaggatgtgaccgacatcacg
gtgaaggattgcactctcaagaagtcgaccaacggcctccggatcaaggcgtacgaggac
gccaagtccgtgctcacggcctccaagatccactatgagaacatcaagatggaggatgca
gcgaaccccataatcatcgacatgaagtactgccccaacaagatttgcaccgccagcggc
gactccaaggtcaccgtcaaggatgtctcctttaagaacgtcaccggcacctcctccacc
cccgaggccgtcagcctgctctgctccgacaagatcccatgcagcggagtcaccatggac
aatgtcaaggtcgagtacagtggcaaaaacaacaagaccatggccgtctgcaacaatgcc
aagggctcctccacgggctgcctcaaggagctcgcctgcctctaa

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