Panicum virgatum (switchgrass): 120705448
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Entry
120705448 CDS
T07260
Name
(RefSeq) probable transcription factor GLK2 isoform X1
KO
K28172
GARP family transcription factor, GLK subfamily
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120705448
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
120705448
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
120705448
NCBI-ProteinID:
XP_039845700
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All DBs
Position
5K:442479..447560
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AA seq
471 aa
AA seq
DB search
MLEVSILRSPSKADHHQRGFVGDHVVFPTSGSVCCDDFMVDDNLLDYIDFSCDAVPFFDA
DGDILPDLEVDPTELLAEFSSPEASPAAARAEAKPPDDLRRRQPEEEAVVLSTSTTTATT
VEEKKAERVLSAKDEKLAAAGVSVTTRTMRKVDGEGSSAEEDSGGAGSDTKWSASAGGHG
KKKAAADKNSSSGKRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILDIMGIDCLTRHNI
ASHLQKYRSHRKHLMAREAEAATWAQKRHQYMYAPAPARKLDAAAAGGGPWVVPTTIGFP
RPALCRALHVWGHPPSAGGVDAPPTMLPVWPRHLAPPRPWAPPPAYWQHQYNAARKWGPH
HQAAAAAAAVTPAMVPQLPRFPVPPHPATMYRPTCSSSMVVPPPPPTSTKLADLQLQLDA
HPSKESIDAAIGDVLVKPWLPLPLGLKPPSMDSVMSELHKQGIPKVPPSSA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaggtgtcgatcctgcggagccctagcaaggcggatcatcatcagcgcgggttc
gtgggcgaccatgtcgtgttcccgacgtccggcagcgtctgctgcgacgatttcatggtc
gacgacaacctgctggactacatcgacttcagctgcgacgccgtgcccttcttcgacgcc
gacggggacatcctccccgacctggaggtggacccaacggagctcctcgccgagttctcc
tccccggaggcgagcccggcggcggctcgcgcggaggccaagccgccggacgacctacga
cgacgacaaccagaagaagaagcagtagtactgagcacgagtacaacgacggcgacgaca
gtagaagagaagaaagcagagcgggtgttgtcggccaaagacgagaaattagccgcggca
ggtgtgagtgtgacgacgaggacgatgaggaaggtggatggtgaggggtcgagcgcggag
gaggactctggcggcgccgggtcggacaccaagtggtcggcgtcggcggggggccacggc
aagaagaaggcggcggcggacaagaactcttccagcggcaaaaggaaggtgaaggtggac
tggacgccggagttgcaccggcggttcgtgcaggcggtggagcagcttggcatcgacaag
gctgtgccgtcccggatcctcgacatcatggggatcgactgcctcacacgacacaacatt
gccagccacctccagaagtaccggtcgcacaggaagcacctgatggcgcgggaggcggag
gccgcgacctgggcgcagaagcgccaccagtacatgtacgcgccggcgccggcgaggaag
ctggacgcggcggcggcaggaggaggcccgtgggtggtgccgacgaccatcgggttcccg
cggcccgccttgtgccgggcgctgcacgtgtggggccacccgcccagcgcaggcggcgtt
gacgctcctccgacgatgctgcccgtgtggccgcggcaccttgcgccgccccggccatgg
gcgccgccgccggcgtactggcagcatcagtataatgcggccaggaagtggggtccacat
catcaggcagcagcagcagcagcagcagtgacgcccgccatggtgccgcagctgccgagg
ttcccggtgccgccgcacccggccaccatgtacagacccacctgcagcagcagtatggtc
gtcccgccgccgccgccgacgagcaccaagctcgccgacttgcagcttcagctcgacgcg
cacccgtccaaggagagcatcgacgcggccattggagatgttttagtgaagccatggctg
ccgctgccgctggggctcaagccgccctccatggacagcgtcatgtcggagctgcacaag
caaggcataccaaaggtcccaccctccagcgcctga
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