Panicum virgatum (switchgrass): 120705463
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Entry
120705463 CDS
T07260
Name
(RefSeq) WPP domain-interacting tail-anchored protein 1-like isoform X1
KO
K27867
WPP domain-interacting tail-anchored protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120705463
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
120705463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GAS
Tropomyosin
DUF4200
BLOC1_2
GIT_CC
Baculo_PEP_C
Peptidase_M13
CorA
Motif
Other DBs
NCBI-GeneID:
120705463
NCBI-ProteinID:
XP_039845721
LinkDB
All DBs
Position
5K:614876..632161
Genome browser
AA seq
685 aa
AA seq
DB search
MDAHSFQDDDYLQEDRLFRGEQQLAGASAGEILARVDLEVAFVFEKLLNLETLVMEIARR
AADIEPLMREPQSTSAESVHEAFEFDVLYCIVDSETNELEKLVVSIQMDIASAESNVSEE
EPGSSLIDKLHTATDSLKKMQELISTIRRESATFEKTIQPSQDNQDFSGTGEVMGYENGH
MSTNTTMQAEDQRNFLQMLQQSIASELDLQQKMFDTQSSVEDLKMKLHYAEQESYFLEES
IGDVYERMFAAENASQLFLGVSKELIGTIDTIQFSLTASVHREGELKSKLEESLMKLNVN
QSTIVPGDSDNNGNQEAVQMQVLSPPEFLTLRNKVQQLEEWLRDSGSHPQWSLLSRGETE
EEQNTMQTEINPFGNIISDLKLAITNAENRTQNAEARCTQLTQTNVQLSEQLDSLKSQGS
DRAGLLETKLKESDTQLEHARASVDAIVEQQGMLRSSMSDMEHLIEDLKEKYLKAETRAE
NAESKCSLLTDTNLELSEELSFLRGRVESLENSLHQANQLKMCTAKEIGSQIKTIADLVA
KLTIQRERLHGQIVTLTKKNRILAQKCKENDNGATSLSKEVTATEGQLRPLKVMEEASLN
CSTTQPKVAPTDSTPQEEVEAEEVTTLEDESGARRTLETVGSIEPLQLNWKHISVAVLVL
LAAVLVYQMYQSDDRAEQVLRKFLG
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggacgcccacagttttcaggacgatgattatcttcaagaggacaggctgttccgcgga
gaacagcagcttgcaggggcaagcgctggggagattctggctagggtggacctcgaggtc
gcattcgtcttcgagaagctcctaaacctggagacgctggtcatggagatcgctcgacga
gccgctgacatcgagcctctcatgcgggagcctcaatccacttccgcagagtcggttcac
gaggctttcgaatttgatgtcctctattgcatcgttgactctgaaaccaatgagttggag
aagctggttgtttctattcagatggatattgctagcgctgaaagcaacgtctcggaggaa
gaacctgggagcagcctcatcgacaagctgcatactgcaacagattccttgaagaagatg
caggagctcatctctactattagaagggagtctgcaaccttcgagaaaaccatacaacct
tcacaagataatcaagatttttcgggaactggtgaggtcatgggatatgaaaatggtcac
atgtcaactaacaccaccatgcaggctgaggatcagagaaattttctgcagatgttacaa
cagtctatagcaagtgaattagatcttcaacagaagatgtttgatacacaatcttctgtt
gaagacctcaaaatgaagctgcattacgccgaacaagaatcgtatttcttggaggaatcc
attggagatgtttacgaaagaatgttcgcagcggagaatgcttcccaactgtttcttggg
gtctcaaaggaactcatcggtacaattgataccatccagttctctctgactgcttcagtt
cacagggaaggtgaacttaaatcaaagttagaggaaagcttgatgaaattaaatgtcaac
cagagcacgatagtgccaggagacagtgacaacaatggcaatcaggaggctgtgcagatg
caggtgctatcaccacctgaattcttgactttgcggaataaggttcagcagctggaggaa
tggttgagggactctggttctcatccgcagtggtcactgctatcaagaggggaaactgaa
gaagagcagaatacaatgcagactgagataaacccatttgggaatattatcagtgatctt
aaacttgccattaccaatgcagaaaatagaacacaaaatgctgaagcaaggtgtacacag
ctcactcaaactaatgttcagcttagcgagcagttggactcccttaaaagtcagggttca
gatagggctggcttgttggagacaaaacttaaggaatcggacactcaattagagcatgca
agagcatcagtagatgctattgttgaacaacagggtatgttaagatcttcgatgtctgat
atggaacatctgattgaagacttgaaagaaaagtatttgaaagctgaaaccagggctgag
aatgctgaatcaaaatgttcattgttgacagacactaatttagagcttagtgaagagctg
tcatttctgagaggtcgagtagaaagtctggaaaactcgttgcatcaagccaatcaactg
aagatgtgcactgcaaaagagattggtagtcaaattaaaactatcgctgacctggttgca
aaacttaccatccaaagagaacgacttcatgggcagattgttacactgacaaaaaagaac
aggatattggctcaaaaatgcaaggagaatgataatggagctacatcattgagcaaagaa
gttactgcaactgaaggtcaactcaggccccttaaagtaatggaggaagcatctctaaac
tgttcaacaacacaacccaaggtggcaccaactgatagcactccacaagaagaggtggaa
gctgaggaggtgactacactggaggatgagtctggtgccaggaggacacttgagacagtt
gggtccattgagccgctgcagctaaattggaagcacatttccgtggcagtgctggtcttg
ctagctgctgttcttgtgtaccagatgtaccaatctgatgacagagctgaacaagtgcta
aggaaatttttaggctag
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