KEGG   Panicum virgatum (switchgrass): 120705475
Entry
120705475         CDS       T07260                                 
Name
(RefSeq) proliferating cell nuclear antigen-like isoform X1
  KO
K04802  proliferating cell nuclear antigen
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03030  DNA replication
pvir03410  Base excision repair
pvir03420  Nucleotide excision repair
pvir03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    120705475
   03410 Base excision repair
    120705475
   03420 Nucleotide excision repair
    120705475
   03430 Mismatch repair
    120705475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvir03032]
    120705475
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120705475
DNA replication proteins [BR:pvir03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    120705475
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     120705475
   MMR (mismatch excision repair)
    Other MMR factors
     120705475
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    120705475
SSDB
Motif
Pfam: PCNA_N
Other DBs
NCBI-GeneID: 120705475
NCBI-ProteinID: XP_039845746
LinkDB
Position
5K:complement(658864..661567)
AA seq 180 aa
MSVAATKFPTFFEMRLDKATFFKDLLEAISDRFSKAYFVFSDKGLDVQAVDSSGFALVAL
LLPFEAFDYYRCDRAVSGGLSLVDMAKAFRRANNDDILTIKAMGDRFNIVTFTFETPSKS
DGVSRDYDFNCVDIDVGPFEIKETPESEYHGVSRVYGYLQQPQQPRGEGHCSFRSCHLGG
NT seq 543 nt   +upstreamnt  +downstreamnt
atgtccgtcgccgccaccaaattccccaccttttttgagatgcggctggacaaggcgacc
ttcttcaaggatctcttggaggcgatcagcgaccggttcagtaaggcctacttcgtcttc
tccgataaaggcctcgatgtccaggccgtggacagcagcggcttcgcgctcgtcgcgctc
ctcctccccttcgaggccttcgattactaccgctgcgaccgcgccgtctccgggggcctg
agcctcgtcgacatggccaaggccttccgccgcgccaacaacgacgacatcctcaccatc
aaggccatgggcgaccggttcaacatcgttaccttcacgttcgagacgcccagtaagtca
gatggtgtgagtcgtgattatgatttcaattgcgtggacatcgatgtcgggcccttcgaa
atcaaggaaaccccggaatcagagtaccatggtgtgagtcgtgtttatgggtatctgcaa
caacctcagcagcctcggggagagggacactgttccttccggagttgtcatctcggtgga
taa

DBGET integrated database retrieval system