Panicum virgatum (switchgrass): 120705522
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Entry
120705522 CDS
T07260
Name
(RefSeq) S-type anion channel SLAH2-like isoform X1
KO
K26672
S-type anion channel
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120705522
Transporters [BR:
pvir02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
120705522
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SLAC1
ResB
DUF5381
Motif
Other DBs
NCBI-GeneID:
120705522
NCBI-ProteinID:
XP_039845841
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Position
5K:complement(1176500..1179435)
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AA seq
642 aa
AA seq
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MTRCTACTRFARFMETDEPAPLPQRSALVHPDAVAVHIASSLSAEEPVFRERHGDMIAAA
MAAAASPGYSPSLPGARQVSISLPASPTGFGASRTEAMTDAPRRMMVPPRAPVATVTLAQ
PDKVVFRSQPIPAAPPGAAKGAAQQGHGDPSRSAPHAARPKARRDKSYDSFKTWSGKLEK
QIATHLLGGRPAPAQPHQEEEEPPEDEDDAASNRRRLSSSMPEVQRFFAALEGPELDKLR
VLLLLITSVAASSEELILPSDKTWPFLLRFPVSAFGMCMGMSSQAILWKRIAISASTRFL
HITVKINLVLWCVSVALMLAVSALYACKVVFYFEAVRREYYHPIRVNFFFAPWIACLFLA
IGVPDAVAASLPHWLWYLLMAPIVCLELKIYGQWISGGQRRLSRVANPSNHLSIVGNFVG
ALLGGIMGLKEGPMFFFSVGLAHYMVLFVTLYQRLPTSETLPRDLHPVFFLFVAAPSVAC
LAWARITGEFGYGSRVAYFIAMFLYASLAVRVNLFRGFSFSLAWWAYTFPMTSAAIASIR
YASEVKNAFTQCLCIALTAAATLTVSALFLTTLLHAVVHRDLFPNDISIAITERRRKPIF
TEEMRASKRRGGGASTKTKQQAALDTAASDLEAARAATTSYT
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgacaagatgcacggcgtgcacccgtttcgcgaggttcatggagacggacgaacctgcg
ccgctgccgcaacgttccgcgctcgtgcacccggacgccgtcgccgttcacatcgcgtcg
agcctctccgccgaggagccggtgttcagagagcgacacggtgacatgatcgccgccgcc
atggccgcagcggcgtccccggggtactcgccgtcgctcccgggcgcgcggcaggtgtcg
atcagcctgccggcgtcgccgaccgggttcggcgcctccaggacggaggccatgacggac
gcgccgcggcggatgatggtgccgccgcgcgccccggtggccaccgtgacgctggcgcag
cctgacaaggtggtgttccggtcccagccgatccccgcggcgcctccgggggcggcgaag
ggcgccgcccagcaggggcacggcgacccgagccggagcgcaccgcacgcggcgaggccc
aaggcgcgcagggacaagagctacgactcgttcaagacgtggtccggcaagctggagaag
cagatcgccacgcacctcctgggcgggcggccggcgccggcgcagccgcatcaggaggag
gaggagcctcccgaggacgaagacgacgcggcgagcaaccgccggcggctgtcttcctcc
atgcccgaagtgcagcgcttcttcgcggcgctggaaggccccgagctcgacaagctgcgg
gtactactgctgctgatcacatccgtagctgcttcctcggaggagctgatcctgccgtcc
gacaagacgtggccgttcctgctccggttcccggtttcggcgttcggcatgtgcatgggc
atgagcagccaggccatcctgtggaagcggatcgccatctcggcgtcgacgcggttcctg
cacatcaccgtcaagatcaacctggtgctgtggtgcgtctcggtggcgctcatgctcgcc
gtgtcggcgctctacgcgtgcaaggtggtgttctacttcgaggcggtgcggcgcgagtac
taccacccgatccgcgtcaacttcttcttcgcgccgtggatcgcgtgcctgttcctggcc
atcggcgtgccggacgcggtggcggccagcctcccgcactggctctggtacctgctcatg
gcgcccatcgtgtgcctggagctcaagatctacggccagtggatctccggcgggcagcgg
cggctctcgcgcgtcgccaacccctccaaccacctctccatcgtcggcaacttcgtcggc
gcgctgctcggcggcatcatgggcctcaaggagggccccatgttcttcttctccgtcggc
ctggcgcactacatggtgctcttcgtgacgctctaccagcggctgcccacgagcgagacg
ctgccccgggatctccacccggtcttcttcctcttcgtcgcggcgcccagcgtggcgtgc
ctggcctgggccaggatcaccggcgagttcggctacggctcccgggtcgcctacttcatc
gccatgttcctctacgcgtcgctcgccgtgcgggtgaacctgttccggggcttcagcttc
tcgctggcgtggtgggcgtacacgttccccatgacgagcgcggcgatcgcgtccatccgg
tacgcgtcggaggtgaagaacgccttcacgcagtgcctgtgcatcgccctgacggcggcc
gccacgctgaccgtgtcggcgctcttcctgacgacgctgctgcacgcggtggtgcaccgc
gacctcttccccaacgacatctccatcgccatcacggagcgccggcgcaagcccatcttc
acagaggagatgagagcgagcaagcgccgcggcggcggggctagtaccaagaccaagcag
caggcggcgctcgacaccgccgcctcggacctggaggccgcgcgcgccgccacgacgtcc
tacacgtag
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