Panicum virgatum (switchgrass): 120705564
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Entry
120705564 CDS
T07260
Name
(RefSeq) jasmonoyl--L-amino acid synthetase GH3.3-like
KO
K14487
auxin responsive GH3 gene family
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120705564
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Motif
Pfam:
GH3
GH3_C
GH3_M
DUF6333
DUF6285
Motif
Other DBs
NCBI-GeneID:
120705564
NCBI-ProteinID:
XP_039845906
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Position
5K:1597375..1602772
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AA seq
593 aa
AA seq
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MPEKKSGDEEGRGGAFCGEAVIAEFEALSRDAAAVQRETLRRILAENAAAEYLRGRGLAG
RTDPDSFRACVPLATHADVEPYIARIADGDASAVLTAGPITSISLSSGTTQGKRKYLPFN
QELVKSTMQIYRTSYAFRNRAFPVEDGKALQFIYGSREFTTKGGLTATTATTNVYRSQEF
MPTMRAIQSQACSPDAVIFGPDFAQSLYCHLLCGLLFADEVRIVSATFAHSVVLAFQTFE
RVWEELCADIRAGALSPTRVTAPAVRKAVSALLAAPNPALADEVARRCAALSNWYGVIPA
LFPNARYVHGIMTGSMEHYVKKLRHYAGGLPLVAAEYGASEGWVGANVEPETPPESATFT
VLPNIGYFEFIPLKASDDGAAAASDTSFAEAEPVGLTEVTVGEHYEVVMTTFAGLYRYRL
GDVVKVAGFYNSTPKLKFVCRRNLMLTINIDKNSEHDLQLAVDSAAKILAAEKLEVVDYS
SHADVSRDPGHYVVFWELNADGNDDVLQGCCDELDRAFTDPGYVGSRKAGAIGPLELRVL
QRGTFQKVLRHYLSHGAPVSQFKSPRCVGRSNAGVLQILSGNVVKVFFSAAYD
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgccggagaagaagagcggcgacgaggaggggcgcggcggcgccttctgcggcgaggcg
gtgatcgccgagttcgaggcgctcagtcgggacgccgccgccgtgcagcgggagacgctg
cgccggatcctcgccgagaacgccgccgccgagtacctccggggccggggcctcgccggc
cgcaccgacccggacagcttccgggcctgcgtgccgctcgccacgcacgccgacgtcgag
ccctacattgcgcgcatcgccgacggcgacgcctccgccgtgctcaccgccgggcccatc
acctccatctccctcagctccggcaccacgcaggggaagcgcaagtacctgcctttcaac
caggagctcgtcaagtccaccatgcagatataccggacttcctacgccttcaggaacagg
gcgttccccgtggaggacggcaaggcgctgcagttcatctacggcagccgggagttcacc
accaagggcggcctcacggcgaccacggccaccaccaacgtgtaccggagccaggagttc
atgcccaccatgcgcgccatccagtcgcaggcgtgcagcccggacgcggtgatcttcggc
ccggacttcgcccagtcgctctactgccacctcctctgcggcctgctcttcgccgacgag
gtccgcatcgtctccgccaccttcgcgcacagcgtcgtcctcgccttccagaccttcgag
cgcgtctgggaggagctctgcgccgacatccgcgccggcgcgctgtccccgacgcgggtc
accgcccccgccgtccgcaaggccgtctcggcgctcctcgccgcgcccaacccggcgctc
gccgacgaggtggcgcgccggtgcgccgcgctcagcaactggtacggcgtcatcccggcg
ctgttccccaacgccaggtacgtgcacggcatcatgacggggtccatggagcactacgtc
aagaagctccgccactacgccggcgggctgcccctcgtcgccgccgagtacggcgcatcc
gagggctgggtcggagccaacgtcgagcccgagacgccgccggagtccgccacattcacc
gtgctccccaacatcggctacttcgagttcatcccgctcaaggccagcgacgacggcgcc
gccgccgcctccgacacctccttcgccgaggcggagccagtcggcctcacggaagtcacc
gtcggcgagcactacgaggtcgtcatgaccacattcgcagggctgtaccggtaccgtctg
ggcgacgtggtgaaggtggccgggttctacaactcgacgcccaagctcaagttcgtgtgc
cggcgcaacctgatgctgaccatcaacatcgacaagaacagcgagcacgacctgcagctc
gccgtggacagcgcggccaagatcctggcggcggagaagctggaggtggtggactacagc
agccacgccgacgtgtcgcgcgacccgggccactacgtcgtcttctgggagctcaacgcc
gacggcaacgacgacgtgctgcagggctgctgcgacgagctggaccgggcgttcacggac
cccgggtacgtcgggtccaggaaggccggcgccatcgggccgctggagctgcgggtgctg
cagcggggcacgttccagaaggtgctccgccactacctctcccacggcgcccccgtgagc
cagttcaagtcgccgcgctgcgtcggccggagcaacgccggcgtcctccagatcctctcc
ggcaacgtcgtcaaggtgttcttcagcgccgcctacgactga
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