Panicum virgatum (switchgrass): 120705571
Help
Entry
120705571 CDS
T07260
Name
(RefSeq) endoglucanase 2-like
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120705571
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
120705571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_9
CBM49
Motif
Other DBs
NCBI-GeneID:
120705571
NCBI-ProteinID:
XP_039845913
LinkDB
All DBs
Position
5K:1686025..1689269
Genome browser
AA seq
669 aa
AA seq
DB search
MPMPSLSFLPRLSSLWALSAMARGRGGGGSRGAAGRMAVVPGRLALFVLAAAAQVACAAA
AGHDYGEALSKSILYFEAQRSGRLPGGQRVGWRADSGLLDGKANGVDLVGGYYDAGDNVK
FGLPMAFTVTMMSWSVVEYGEQMAAAGELGHALEALRWGTDYFVKAHPEANVLYGEVGDG
DSDHGCWQRPEDMTTSRQAYRLDPQHPGSELAGETAAAMAAASLVFRSSDPGYANQLLQH
SKQLFDFADKYRGRYDSSITVARKYYASSSGYGDELLWAAVWLYKASGDGQYLDYLANNA
DALGGTGWSINEFGWDVKYPGVQVLAAMLLLRGKAGGAHADVLRRYKQKADLFACSCLGR
AGATNVRRTPGGMIYLQSWNNVQFVTSASFLLAAYGDHLAAARQAAQCPSGAAAAQPAEL
LAFARSQVDYILGSNPRATSYMVGYGATFPQQAHHRGASIVSVKADPSFVSCQGGFNSWY
HRRGSNPNLLVGATVGGPDEYDNFADERDNYEQTEATTYNNAPLMGVLARLHGGGRRFGR
SSSLADEVSATTLKNDNQTSLPPPSLAAAAAEDASPIEIEQKATASWTERGKTYHRYAVT
VTNRSPKTVHELHIGISKLSGKVWGVDKARYGYVLPSWLPSLPAGKSAAFVYIQAAPPAH
VWVTGYKIL
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgccaatgccatccctttccttccttcctcggctatcctctctctgggctctctcggcc
atggccaggggacgaggaggtggaggatcgcgcggcgcggccggcagaatggctgtcgtt
cccggccgcctcgccctgttcgtgctcgccgccgcggcgcaggtggcgtgcgcggccgcc
gccgggcacgactacggcgaggcgctgagcaagagcatcctctacttcgaggcgcagcgc
tccgggcggctccccggcggccagcgggtcggctggcgcgccgactccggcctgctcgac
ggcaaggccaacggggtggacctggtgggcgggtactacgacgccggcgacaacgtcaag
ttcggcctgccgatggcgttcacggtgaccatgatgtcgtggagcgtcgtcgagtacggc
gagcagatggcggcggccggcgagctgggccacgccctcgaggccctcaggtggggcacc
gactacttcgtcaaggcgcacccggaggccaacgtgctctacggagaggtcggcgacggt
gactcggaccacggctgctggcagcgaccggaggacatgacgacgagccggcaggcgtac
cggctggacccccagcaccccgggtccgagctcgccggagaaactgccgcagcaatggcc
gcggcgtcgctcgtcttccgcagctccgaccccggctacgcgaaccagctcctccaacac
tccaagcagctgtttgatttcgccgacaagtaccggggccggtacgacagcagcatcacc
gtcgcgcgcaaatactatgcctcctccagcggatacggggacgagctgctgtgggcggcg
gtgtggctgtacaaggcgtccggcgacgggcagtacctggactaccttgccaacaacgcc
gacgcgctgggcggcacgggctggtccatcaacgagttcggctgggacgtcaagtacccc
ggagtgcaggtcctggccgccatgctgctcctgcggggcaaggccggcggcgcgcacgcc
gacgtgctccggcggtacaagcagaaggcggacctcttcgcgtgctcctgcctcggccgc
gccggcgccaccaacgtccggcggacgcccggaggcatgatctacctccagagctggaac
aacgtgcagttcgtcaccagcgcgtcgttcctgctggcggcgtacggcgaccacctcgcc
gcggcgcggcaggccgcgcagtgcccgtccggggccgcggcggcgcagcccgcggagctc
ctcgcgttcgccaggtcgcaggtggactacatcctggggagcaacccgagggcgacgagc
tacatggtcggctacggcgcgacgttcccgcagcaggcgcaccaccgcggcgcgtccatc
gtgtccgtcaaggccgacccctccttcgtgagctgccagggcggcttcaacagctggtac
caccgccgcggcagcaacccgaaccttctcgtaggcgccaccgtcggcgggccggacgag
tacgacaacttcgccgacgagagggacaactacgagcagacggaggccaccacctacaac
aacgcgccgctcatgggcgtgctcgctcggctgcacggcggcggccgccggtttggtcgc
tctagctcgctcgccgatgaggtctctgcaacaaccctgaagaacgacaaccagacctca
ctgccacctccatctctggcggcagctgctgctgaagacgcctcgcccatcgagatcgag
cagaaggcgacggcgtcgtggacggagaggggcaagacgtaccaccggtacgccgtgacg
gtgaccaaccggtcgcccaagacggtccacgagctccacatcggcatctccaagctctcc
ggcaaggtgtggggggtcgacaaggcgcgctacggctacgtgctcccgagctggctgccg
tcgctgcccgccggcaagagcgccgcgttcgtgtacatccaggccgcgccgccggcgcac
gtctgggtcaccggctacaagatcctctag
DBGET
integrated database retrieval system
