Panicum virgatum (switchgrass): 120705624
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Entry
120705624 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120705624 isoform X1
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120705624
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120705624
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120705624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
Beta-prop_KIB1-4
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
120705624
NCBI-ProteinID:
XP_039846006
LinkDB
All DBs
Position
1K:36851648..36856790
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AA seq
728 aa
AA seq
DB search
MDPGRGPAERPPSLAASPCKKRKVAGAHSHGSLDSPNLIIGIGFAKSNECTGKISNKNLH
VIGDTPNPYEQVISAIGRTLSPFDEEKLILCFGFGDESTRDHSVFSFYSDNQPCCGFKQA
LARYRELVPQLSFAGPTSFAPIIETVIGIVENSGGQYHVLLIIADGQVTRNIETGNGQLS
PQEEETLDAIVKASNYPLSIVLIGIGDGPWDMMSRFDDNIPYRAFDNFQFVSFTEQMLKS
SSSKKEGDFALSTLMKSAGHFEAASSFQLDGEQRGFSDRNVLPPPVADQRQYSGYSSTCN
NASVQKIASADSDMCDPLTAEGHKVTSAHRNPKFVEIDNVHHPDLESYLHMTESPSEELE
DIECIEDRHGCRLKQEICSNDNGDISSTSDKTIVNWLSLPPGVVWRIWGSLCKDSDRQKM
RFVSKEWYKEIPEVMARRPWVIGSGTIHGIFHSINGKSLSQMKFRCEIPDGSFYSSCSSF
LVMQTDNEHFLWSPSNRMSLKLPLKTYEKIVMHEDSDSYAFAYSSGKVKFSYGRPQVESS
WKQILCYDKSIGDICQCDNEYYAVSNMFRLYWLDQKSSKLELIGPEQTSNDIKKLLLDGN
FPDHLFLADVNHELVIVAVGRNLRSVDLFKVLWISDRMTSLVRVPDLGIWSLFLGRNQAI
ALSADDFPGISPSTLYLALDPLMDDEEPTVQLYNLATRSVVDTGYPVHKLGSPFFYQPDI
VSASVLYE
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaccctggccgaggccccgctgagcgcccgccgtcgctcgccgcctcaccttgtaag
aagcgaaaggttgctggtgcacattctcatggttctttggactccccaaacttgatcata
gggattggtttcgccaagagcaatgaatgtacagggaaaatctccaacaagaatttgcat
gtaattggggacactccaaacccatatgagcaggttatttccgccatagggagaactctg
tcaccatttgatgaggagaagcttatactatgctttggatttggcgatgaaagcactcgt
gaccattcagtatttagcttctatagtgataaccagccctgttgtggttttaaacaagca
cttgctcgctacagggaacttgttccgcaacttagttttgctggtccaacttcatttgca
cctatcatcgaaactgttataggaattgttgagaatagtggtggccagtatcatgtcctc
cttataattgcagatggacaggttacacgaaatattgaaactggaaatggacagttgagc
cctcaggaagaggagaccctagatgccattgttaaagctagtaattatcctctttcaatt
gtgcttatcgggatcggtgatggaccatgggacatgatgagccgatttgatgacaacata
ccttatcgtgcatttgataattttcagtttgtgagcttcacagagcagatgttgaaatca
tcatccagcaaaaaggaaggagactttgctctttccacattgatgaagagtgcaggacat
tttgaggccgcatcgagcttccagcttgatggtgaacaaagaggattttcagatcgaaac
gtgttacctccacctgtggctgatcagagacagtattctggatattcatccacctgcaat
aatgcatcagttcaaaaaattgcatcagcggacagtgatatgtgtgatccactgactgct
gagggtcataaagttaccagtgcgcacaggaatcccaagtttgtagaaattgataatgtc
catcatcctgatttggaatcatatcttcacatgactgagagtccttcggaagaacttgaa
gacatagagtgcattgaagatcgacatggttgcagattgaagcaagaaatttgttcaaat
gataacggagatatttccagtacatctgacaagacaattgtgaattggctttcactccca
cccggtgtggtgtggcgcatttggggttcactttgcaaagattctgatcgccaaaagatg
cgctttgtctctaaggagtggtataaggagatacctgaagttatggcccgacgcccttgg
gtaattgggtctggtacgattcatggaatcttccattctattaatgggaagagtctgtcg
caaatgaagttcaggtgtgaaataccagatgggtctttctatagtagctgttcaagcttt
ctcgtgatgcagacagacaacgaacattttttgtggagccctagcaacaggatgtctctg
aaactgccactaaagacatacgagaagattgtaatgcatgaagactctgattcttacgcc
tttgcctactccagtggtaaggtcaaattttcctatggaagaccccaagttgagtcaagc
tggaagcagatattgtgctatgacaaatctatcggagatatttgccagtgtgataatgaa
tattatgctgtcagtaacatgtttcgcctctactggctggatcaaaagagcagtaagctt
gaacttattggacccgagcaaacgtcaaatgacatcaagaaattactgctggatggaaat
tttccagaccacctcttcctcgctgatgtaaatcatgagctggtgattgtcgcagttggc
cgaaatctgcggtctgtggacttgttcaaggttctctggatcagtgaccgaatgacaagt
ttggtaagggtcccggaccttggtatttggtcattgtttctcggcagaaaccaagcaatt
gcattaagtgctgacgacttccctggtattagtccaagcactttgtaccttgctttagat
ccgctgatggatgatgaggagcctaccgtgcagttgtacaatcttgcgacaagaagtgtt
gtagatacaggctatccggtccacaagctaggttccccctttttttaccaacctgatata
gtttcagcatctgtattgtatgagtga
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