Panicum virgatum (switchgrass): 120705649
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Entry
120705649 CDS
T07260
Name
(RefSeq) WD repeat-containing protein 53-like
KO
K24748
WD repeat-containing protein 53
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
120705649
Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
120705649
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EML
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
120705649
NCBI-ProteinID:
XP_039846036
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All DBs
Position
5K:complement(2687964..2692154)
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AA seq
388 aa
AA seq
DB search
MSEAESAAAAVPAAAAGRKPRRLRGHKKGAVTCCVASSARPGVVASAGEDGCLCWFDLRT
KDVLLTIEAANKPISSICFKPGNEDFVYASAGNEILSFDVRMGPQSKPLETYNYNRDEIN
QIAVSSKGFLAAADDSGDVKIVSTIQKCLYKRLREAHTSICSTVQFIPWRPWTAITGGLD
SKLAVWDFSKGRTLFSIDNGSPELQNGSSSGSAGQCLNPAFVHSLAVSEEGILGGLYKVC
AVARGDGAVDVVDLEYELAPSKSKGPPRLATSTMSSKRTEPGDGSSNQCQVERIHLDFTM
GGHTAAVSCVAFSAFGEKGKFLVSGGNDSSVKIWDWSKGFSSETNSDAELVLDIDVKKKV
NWLCTTPTDSDNLIVCDTSKVVKVYNFR
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggctgaatcggctgcagcggcggtccctgcggcagcggcggggcggaagccc
cggcggctgcggggacacaagaagggcgccgtcacctgctgcgtcgcgtcctctgcccgc
ccgggcgtcgtcgcgtccgccggcgaggatggatgtctttgctggtttgatctgcgcacc
aaagatgtgcttctgaccattgaagcagcaaataagccaatttcttcaatttgctttaaa
ccaggaaatgaagacttcgtgtatgcctctgctggaaatgaaatattgtcctttgatgtt
cgtatgggacctcaatcaaagccattagagacatataactacaatagagatgaaatcaat
cagattgctgtcagctctaaaggttttcttgctgctgcagatgacagtggggatgttaag
attgtcagtaccattcagaaatgcctgtataaaagattgagggaagcccacacaagtatt
tgcagcactgtacaattcattccttggagaccttggacagctatcactggtggccttgac
tcgaagcttgctgtgtgggatttttccaaagggcgaacgctattttctattgataacgga
tcacctgaattacaaaatggcagttcttccgggagtgcagggcaatgtttgaaccctgct
tttgttcattcgctagcagtttctgaagaaggcattttgggtgggctgtacaaagtttgt
gctgttgcaaggggcgatggtgctgttgatgtagttgatctcgaatatgaactggcacct
tctaaatcgaaaggacctcctcgtctagcaacatcaacaatgagttcaaaaagaactgaa
cctggagatggaagcagtaatcaatgtcaagtggaaaggatacatcttgatttcacaatg
ggtggccatactgcagctgtgtcttgtgtagcattttctgcatttggtgagaaaggaaag
ttccttgtttcaggcggcaatgattcatcagtgaagatatgggattggtccaaaggattt
tcttctgaaacaaacagcgatgctgaattggtgttggatattgatgtaaagaaaaaggta
aattggttgtgtactaccccaaccgactcagataatctgattgtgtgcgacacatccaag
gtggtcaaagtatacaattttcggtag
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