Panicum virgatum (switchgrass): 120705669
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Entry
120705669 CDS
T07260
Name
(RefSeq) biogenesis of lysosome-related organelles complex 1 subunit 1-like isoform X1
KO
K20185
biogenesis of lysosome-related organelles complex 1 subunit 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120705669
Membrane trafficking [BR:
pvir04131
]
Endosome - Lysosome transport
Arf GTPases and associated proteins
BLOC-one-related complex (BORC)
120705669
Others
BLOC-1 complex
120705669
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCN5L1
Motif
Other DBs
NCBI-GeneID:
120705669
NCBI-ProteinID:
XP_039846061
LinkDB
All DBs
Position
5K:complement(2923388..2930756)
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AA seq
221 aa
AA seq
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MAIMSCIPKCKCFEIYFSEANVRNSILANPLVSNPIITIFSKIKYFKKGLVCIRYPRRLK
SGTTVLQSLVEILRALIWSVEEQRNRSGDRQPLAAGGKRELEEALLHIIQRHHHQSLRQS
QQTERAKKDALRSALRVSDLLVDTVDGGVQELFVNEKRIEHEARALLTTIARYRKQTDQW
LAATNEINSVLKEIGDFENWMKIMGFDCKSINAAIPNIHRS
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggccataatgtcatgtattccgaagtgcaaatgtttcgagatctattttagtgaagcc
aacgttaggaattctattttagcgaacccgcttgtttcgaatcctataataacaattttc
tcgaagataaaatattttaaaaaagggctcgtttgcatcaggtacccaagacggttaaaa
tcagggactactgtattgcagagtttagtagaaatcctccgagctctgatttggtcggtg
gaggagcaaaggaatcgctccggcgaccggcagccactggcggcgggtgggaagcgggag
ctggaagaggcgctgcttcacatcatacaacgccaccaccaccaatccctccgccaaagc
caacaaactgagagagccaagaaggatgccttgagaagcgcgctgcgggtgtccgatctc
ctcgtcgacacggtcgacggtggcgtgcaggagctcttcgtcaacgagaagcgcattgag
catgaggcccgcgcgctgctcaccactatcgcgcgctacaggaagcagactgaccagtgg
ctggctgccaccaatgaaatcaactcagtcttgaaggaaattggagatttcgagaactgg
atgaagatcatgggctttgactgtaaaagtatcaatgcagcgatacccaatattcatcgg
tcatga
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