Panicum virgatum (switchgrass): 120705712
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Entry
120705712 CDS
T07260
Name
(RefSeq) protein indeterminate-domain 7-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120705712
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120705712
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_STOP2_C
zf-met
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
120705712
NCBI-ProteinID:
XP_039846137
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All DBs
Position
5K:complement(3477127..3479908)
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AA seq
490 aa
AA seq
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MMLKDLAAIQQQQQLQMPADENMSNLTSASGDQASVSSHPLPPPAKKKRNLPGNPDPDAE
VIALSPRTLMATNRYVCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRNPKEAVRKKVYVCP
EPGCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCDRCAKRYAVHSDWKAHSKVCGTREYR
CDCGTLFSRRDSFITHRAFCDALAEESARAVTAAAVAAAGQHHPGMLFSQGGDGGAAGGL
HLPAAVLDHQSQPLGGHGMSLQELCLKREREQQQQQFVPSWLTPQQQQQQHLELQAAGAG
SNMAVFGSARPPLDQDYMGSSTPESTAQPAAGLGFGVSPSSSAAATASAHMSATALLQKA
AQMGATLSRPSNQGQMASTHSTSTTTAATANAGNAPSTGAGAVGFGASHHFGADERTSRA
DRDAGSGGGNAGVGAAAGGGNDGLTRDFLGLRAFSHGDILSMAGFDPCMSSASSAAYEQG
HQSSKQPWHV
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgatgctcaaggatctggcagcgattcagcagcaacagcagctgcagatgcccgccgac
gagaacatgtccaacctcacctccgcctccggcgaccaggccagcgtctcctcccacccg
ctcccgccgcccgccaagaagaagcgcaacctccccgggaatccagaccccgacgccgag
gtgatcgcgctgtcgccgcgcacgctgatggcgacgaaccggtacgtgtgcgaggtgtgc
ggcaaggggttccaacgcgaccagaacctgcagctgcaccggcgcggccacaacctgccg
tggaagctcaagcagcgcaaccccaaggaggcggtgcgcaagaaggtgtacgtgtgcccg
gagcccggctgcgtgcaccacgacccctcccgcgccctcggcgacctcaccggcatcaag
aagcacttcagccgcaagcacggcgagaagaagtggaagtgcgaccgctgcgccaagcgc
tacgccgtccactccgactggaaggcgcactccaaggtctgcggcacgcgcgagtaccga
tgcgactgcggcaccctcttctcaaggagggacagcttcatcacgcaccgggccttctgc
gacgcgctcgcggaggagagcgccagggcggtgaccgcggcggcggtggcggcggcgggc
cagcaccaccccgggatgctcttctcgcagggcggcgacggcggcgccgcgggcgggctg
cacctgccggcggcggtgctcgaccaccagtcgcagccgctgggcggccacgggatgtcc
ttgcaagagctgtgcctcaagagggagagggagcagcagcagcagcagttcgtgccgtcg
tggctcacaccccagcagcagcagcagcagcacctggagctgcaggcggctggcgccggc
agtaacatggccgtgttcgggtcggcgaggccgccgctggaccaggactacatggggagc
tccacgccggagagcaccgcgcagccggcggcgggcctcgggttcggggtctcgccgtcg
tcctccgccgctgccacggcctccgcgcacatgtcggccaccgcgctgctgcagaaggcg
gcgcagatgggtgcaacgctgagccggccgtcgaaccagggccagatggcgagcacccac
agcaccagcaccaccactgctgccactgccaacgcaggcaacgcgcctagcactggcgcc
ggtgccgtcggcttcggggcatctcaccactttggagcggatgagaggaccagcagggcc
gatcgcgacgccggtagcggcggcggcaatgccggcgtgggtgccgccgccggaggcggc
aacgacggcctcacccgggacttcttggggctccgggccttctcccacggcgacatactg
agcatggccgggttcgatccctgcatgtcgtcggcctcgtcggcggcgtacgagcaaggg
caccagagcagcaagcagccgtggcatgtctag
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