KEGG   Panicum virgatum (switchgrass): 120705715
Entry
120705715         CDS       T07260                                 
Name
(RefSeq) BTB/POZ domain and ankyrin repeat-containing protein NPR1-like
  KO
K14508  regulatory protein NPR1
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04075  Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04075 Plant hormone signal transduction
    120705715
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvir04121]
    120705715
Ubiquitin system [BR:pvir04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Adoptor and target recognizing subunit (BTB)
     120705715
SSDB
Motif
Pfam: NPR1_like_C DUF3420 Ank_2 BTB Ank Ank_4 Ank_5
Other DBs
NCBI-GeneID: 120705715
NCBI-ProteinID: XP_039846139
LinkDB
Position
5K:3505671..3509686
AA seq 573 aa
MEPMDSQVTAVALSDSDSFSVDGADAADADLQALRRLSDNLAAAFRSPHDLADARITVPG
APDLRVHRCVLCARSPFLRDLFARRAAGAGEGKDKDKDKVELRELLGEEVEVGYEALHLV
LEYLYSGRVGPLPKAACLCVDEGGCAHVGCRPAVAFMAQVLFAASTFEVAELTSLFQRRL
LDVLDKVEVDNLPLILSVANLCSKSCVKLLERCLEIVIRSNLDMITLEKALPPDLLEQIV
DARLSLGLVSPEDKGFPNIHVRRVHRALDSDDVDLVRMLLKEGKTNLDDAYALHYAVEHC
DSKITTELLDLALADVNHRNPRGYTVLHIAAMRMEPKIIVSLLTKGARPSDLTFDNRKAV
QISKRLTKHGDYFGPTEDGKPSPKDRLCIEILEQAERRDPQLGEASVSLAIAGDSLRGKL
LYLENRVALARILFPMEAKVAMDIAQVDGTMEFNLGSSGNLPTGIQRTTVDLNDTPFIMK
EEHLTRMRALSKTVELGKRFFPRCSKVLDQIMDDEPELVSLGRDTSTEKNRRFHDLQDVL
QKAFSEDKEENDRSARSSSSSSTTSMGAVRPRR
NT seq 1722 nt   +upstreamnt  +downstreamnt
atggagcccatggacagccaggtcaccgccgtcgcgctctccgactccgacagcttctcc
gtcgacggcgccgacgcggcggacgccgacctgcaggcgctccgccgcctctccgacaac
ctcgccgccgcgttccgctccccccacgacctcgccgacgcgcgcatcacggtgcccggc
gcgcccgacctccgcgtgcaccgctgcgtgctctgcgcgcgcagccccttcctgcgcgac
ctcttcgcgcgccgcgccgcgggcgccggcgaggggaaggacaaggacaaggacaaggtc
gagctccgggagctgctcggcgaggaggtggaggtcggctacgaggcgctgcatctggtg
ctcgagtacctctacagcggccgcgtcggccccctgcccaaggcggcgtgcctctgcgtc
gacgagggcggctgcgcgcacgtcggctgccgccccgccgtcgccttcatggcgcaggtc
ctcttcgcggcctccaccttcgaggtggcagagctcaccagcctcttccagcggcggctc
cttgatgtccttgacaaggttgaagtagacaacctcccactgatcttatctgttgcaaac
ttatgcagcaaatcttgcgtgaaactgctcgagagatgccttgagatagtaattcggtca
aatcttgatatgattactctcgagaaggctttgcctccagatcttcttgaacaaattgtt
gatgcaaggctaagtcttggattagtttcccctgaagacaagggcttccctaacatacat
gtaagaagagtacacagagcgctggattccgatgatgtggatctagtcaggatgctactc
aaggaaggaaaaactaatcttgatgacgcatatgcattgcactatgctgttgaacattgt
gactcaaagatcacaacagagcttctggatctcgcacttgcagatgttaatcataggaac
ccgagaggttatacagttcttcatattgctgctatgagaatggagcctaaaatcattgtc
tctcttttgaccaagggagctcggccatcagacctcacatttgataatagaaaagcagta
cagatatctaagcggcttacaaagcatggggattactttgggcctactgaggatggaaaa
ccttctccaaaagatagattatgtattgagatactagagcaagctgaaagaagggatcca
caacttggagaagcatcggtttctcttgcaatagcaggagacagtctgcgtggaaaattg
ctgtaccttgaaaatcgagttgctttagcgaggatattgtttccgatggaggcaaaggta
gcaatggacattgcccaagttgatggaaccatggaatttaaccttggttctagtggtaat
ctgcctaccgggatacagcggacaactgttgatctaaatgacactcctttcataatgaag
gaagaacacttgactcggatgagggctctctccaaaacagtggaacttgggaagcgcttc
ttcccgcggtgttcaaaagtactcgaccagatcatggacgatgaaccagagctggtttct
ctcgggagagacacatccactgagaagaacaggaggttccatgacctccaagacgtgctc
cagaaggcgttcagtgaggacaaggaggagaacgacaggtcggcccgttcatcttcctcc
tcgtcgacaacatcgatgggagccgtccgccctaggagatga

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