Panicum virgatum (switchgrass): 120705729
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Entry
120705729 CDS
T07260
Name
(RefSeq) transcription factor MYB30-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120705729
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120705729
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GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_Rap1
Motif
Other DBs
NCBI-GeneID:
120705729
NCBI-ProteinID:
XP_039846155
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All DBs
Position
5K:3799289..3800815
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AA seq
319 aa
AA seq
DB search
MDGCIQPQTHNARTGTSTTWLLLPQHNSRVLSPTLPAVSSLLLVLSLLLSRVGGGSTQDG
RVPMGRTPCCDRVAVKRGPWSPEEDEALRSYVQRHGSGGNWISMPKKAGLKRCGKSCRLR
WLNYLRPDIRHGGFTDEEDAVILSLYTQLGSKWSLIASQLEGRTDNDVKNYWNTKLKKRL
LAAAATAGIVSTRSPPSVPRLPAAPASTPAAAAATVATHASSLFPLLAIPTVKTEMYTCD
DFLAPAAFRDDPFAAADGSTSASAASSASNWSADNGAAGGGEGSFLLDFCAGSGLGAADD
HLQLPGGYYYPLDPSLSLV
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggatggctgcatccaaccacaaacccacaatgcaaggacaggtacaagtaccacctgg
ctcctgctcccccagcacaacagccgggtcctctcccccactctcccagccgtgtcctct
cttctcctcgtcctctccctcttgctctcgcgcgtaggaggagggagcacgcaggacggg
cgcgtgcccatgggtaggacgccgtgctgcgacagggtcgccgtgaagcggggcccctgg
tcgccggaggaggacgaggcgctgcgcagctacgtccagcgccacggcagcggcggcaac
tggatctccatgcccaagaaagccgggctcaagaggtgcggcaagagttgcaggcttcgc
tggctcaactacctccgcccggacatccgccacggcggcttcaccgacgaggaggacgcc
gtcatcctctccctctacacccagcttggtagcaagtggtcgctgatcgcctcgcagctg
gaggggagaacggacaacgacgtcaagaactactggaacaccaagctcaagaagcgcctc
ctcgccgccgcggccacagccggcatcgtctccacccgctccccgccatccgttccgcgg
ctaccggcggcgccggcctcgacacctgcggcggccgcggccaccgtcgccacgcacgcg
tcatcgctgttcccgttgctcgccatcccgaccgtgaagaccgagatgtacacctgcgac
gacttcctggcgccggcggcgttccgggacgacccgttcgccgcggccgacggctccacc
tcggcctccgcggcgtcgtcggcgtccaactggtcggcggacaacggtgctgcgggcggc
ggcgaggggtcgttcctcctggacttctgcgcgggctccggcctcggcgccgccgacgac
cacctccagctccccggcggctactactaccctctcgacccgagcttgtcgctggtatag
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