KEGG   Panicum virgatum (switchgrass): 120705836
Entry
120705836         CDS       T07260                                 
Name
(RefSeq) ABC transporter C family member 3-like
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir02010  ABC transporters
pvir04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    120705836
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    120705836
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_29 MMR_HSR1 AAA_23 AAA_21 AAA_16 Dynamin_N DUF87 nSTAND1
Other DBs
NCBI-GeneID: 120705836
NCBI-ProteinID: XP_039846301
LinkDB
Position
5K:complement(5182873..5188882)
AA seq 1504 aa
MPASTAAPPFAAAAAGEGPGALLLAPFLQQPLFIHGVGAGAHVVLALAVAGRLLLRRCAG
GRAGAKDGDGASPRPAASRCYGVAACATWALAAFHSLLAAYACYLGAGAGWSRDAAAELA
DAAARAVAWLLLAAYIQFGSGRRRGERFPPAPLRLWWALFLLLSVLAAAAHVATSLGGLP
VPARSWALDAVSVVAAAVLLCAGFLGGRVAGGSAAEEPLLNGAHGAAVGSGRSAAEASKF
TGAGFLSMLTFSWIGPLLAVGHKKTLGFDDVPGLDPGDSVAGLLPTFEANLEAVAGDVSG
SRRKAVTAFKLTKALVRTVWWHVAVTAFYALVYNVSTYVGPYLIDSLVQYLNGDERYASK
GQLLVLAFIVAKVFECLSQRHWFFRLQQAGIRARSALVAVVYQKGLALSSQSRQSRTSGE
MINIISVDADRVGIFSWYMHDLWLVPLQVGMALFILYSTLGLASLAALGATVVVMLANVP
PGQMQEKFQQKLMDCKDVRMKATSEILRNMRILKLQGWEMKFLSKIIELRKTETNWLKKY
LYTSTLVTFVFWGAPTFVAVVTFGACMLMGIPLESGKVLSALATFRVLQEPIYNLPDTIS
MVIQTKVSLDRIASFLCLEELPTDAVQRLPSGSSDVAIEVRNGCFSWEASPQLLTLKDLN
FQARQGMRVAVCGTVGSGKSSLLSCILGELPKLSGEVKICGTTAYVSQSAWIQSGKIQDN
ILFGMEMDNEKYERVLESCSLKKDLEILPFGDQTVIGERGINLSGGQKQRVQIARALYQE
ADIYLFDDPFSAVDAHTGSHLFKECLLGALASKTVVYVTHQIEFLPAADLILVMKDGRIA
QAGKYNDILGSGEEFMELVGAHKDALMALDEIDAADGSNETSPSRGTAKLTKSLSSAEKK
DKQDEGDNQSGQLVQEEEREKGKVGFWVYWKYLTLAYKGALVPLVLLAQILFQVLQIGSN
YWMAWAAPVSKDVEPPVSMSTLIYVYIALAVGSSFCVLLRALFLVTASYKTATLLFNKMH
MSIFRAPMSFFDSTPSGRILNRASTDQSEVDTSIAYQMGSVAFAIIQLVGIIAVMSQVAW
QVFVVFIPVVAACFWYQRYYIDTARELQRLVGVCKAPIIQHFAESITGSTTIRSFGKENQ
FVSANSHLMDAYSRPKFYNAGAMEWLCFRLDVLSSLTFAFSLIFLINLPPGIIDPGIAGL
AVTYGLNLNMLQAWVVWSMCNLENKIISVERILQYMSIREEPPLSMSEDKLAHDWPSQGE
IQLHDLHVKYAPQLPFVLKGLTVTFPGGLKTGIVGRTGSGKSTLIQALFRIVDPTIGQIL
IDGVDICTIGLHDLRSRLSIIPQEPTMFEGTVRSNLDPLGEYTDNQIWEALDCCQLGDEV
RKKELKLDSPVIENGENWSVGQRQLVCLGRVILKRGKILVLDEATASVDTATDNLIQKTL
RQQFSEATVITIAHRITSVLDSDMVLLLDNGVAVERDTPARLLEDKSSLFSKLVAEYTMR
STHA
NT seq 4515 nt   +upstreamnt  +downstreamnt
atgcccgcgtccacggccgcgccgcctttcgcggcggcggcggcgggcgaggggcccggg
gccctcctcctcgcccccttcctgcagcagccgctcttcatccacggcgtgggcgccggg
gcccacgtcgtcctcgcgctcgccgtcgcggggcgcctgctcctccgccgctgcgccggc
ggccgcgccggcgccaaggacggggacggcgcctccccgcgccccgccgcgtcccgctgc
tacggcgtcgcggcctgcgccacgtgggcgctggcggcgttccactccctgctcgcggcg
tacgcgtgctacctgggcgcgggcgccggctggtcgcgcgacgccgcggccgagctggcg
gacgccgccgcgcgcgctgtggcgtggctgctgctggccgcgtacatccagttcgggtcc
gggcggcggcgcggggagcggttccccccggcgccgctcaggctctggtgggcgctcttc
ctgctgctctccgtgctcgccgccgccgcccacgtggcgacgagcctcggcgggctcccc
gtgcccgcgcgctcgtgggcgctcgacgccgtctcggtcgtcgcggccgcggttctgctc
tgcgccgggttcttaggcgggcgggtggcgggcggctctgcggccgaggagcctctgctg
aacggcgcgcatggggcggcggtcgggagcggccgcagcgccgcggaggcgtccaagttc
accggcgctggcttcctcagcatgctcaccttctcgtggatagggcccctgctcgccgtc
ggccacaagaagacgctcggctttgacgacgtgccggggctcgaccccggcgacagcgtc
gccggcctgctcccgacgttcgaggccaacctcgaggcggtcgccggcgacgtctctggc
tcccgccggaaggccgtcacggcgttcaaactcaccaaggccctagtgcgcaccgtgtgg
tggcacgtcgctgtgaccgcgttctacgcgctggtctacaacgtctccacctacgttggc
ccgtacctcatcgactccctggtgcagtacctcaacggcgacgagaggtacgcgagcaag
gggcagctcctcgtcctcgccttcatcgtcgccaaggtgttcgagtgcctgtcgcagcgc
cactggttcttccggctgcagcaggccgggatacgcgcgcggtccgcgcttgtcgccgtc
gtgtaccagaaggggctcgcgctgtcaagccagtcgaggcagagccgcaccagcggcgag
atgatcaacatcatcagcgtcgacgccgaccgcgtggggatcttctcatggtacatgcac
gacctctggctggtacccttgcaagtcggcatggcgctgttcatcctgtactccaccctc
gggctcgcttcgctcgccgcgctcggcgccaccgtggtcgtcatgcttgccaatgtgcct
ccggggcaaatgcaggagaagttccagcagaagctgatggactgcaaggatgtcaggatg
aaggcaacgtccgagatcctgcgcaacatgcggattctgaagctgcaagggtgggagatg
aagttcttgtccaagatcattgagctgaggaagacagaaacaaattggctgaagaaatac
ctctacacatcgactttggtcaccttcgtgttctggggagctcctacctttgttgctgtg
gtgacttttggggcttgcatgctcatggggatcccattggagtctgggaaagtgctatct
gcactggccacattccgcgtgctgcaggaaccaatatacaaccttcctgacacgatttca
atggtgattcagaccaaggtatctcttgacaggatagcatccttcctatgtctggaggag
ctgcccactgatgctgtgcagaggctgccaagtgggagctcagatgttgcaattgaggtc
aggaacgggtgcttctcctgggaggcctcaccacaattgctgacgctgaaggacctgaat
ttccaagctcggcaaggcatgcgcgttgcagtttgtgggacggttggttccggcaaatcg
agcttgctatcttgcattcttggcgagcttccaaagttatcgggagaggttaagatttgt
gggacgactgcatatgtcagccagtcagcatggatacagagcggcaaaatacaggacaac
atactgtttggcatggagatggataatgagaagtatgaaagggtccttgagtcctgctca
cttaagaaagacttggaaattttgccatttggtgaccagactgtcatcggagagcgaggc
atcaaccttagtggtgggcagaagcaaagggttcagatagcccgagccttgtatcaggaa
gcagacatctatttgtttgatgatccattcagtgcagttgatgctcatacaggatcccac
cttttcaaggaatgcttgcttggggctttggcttcaaaaacagtagtttatgttacgcat
cagattgaatttctaccagctgctgatctcattctggtcatgaaagatgggagaatagca
caagcaggcaaatacaatgatatacttggttcaggggaagaattcatggagctggttggt
gctcacaaggatgctctgatggcattggatgagattgatgctgcggatggaagcaatgag
acctccccttccagaggcacagcaaagctgaccaaatcactatcatctgccgagaagaaa
gataaacaggatgaaggggacaatcagagtggacagctggtgcaggaagaagaaagggag
aaaggcaaagttggattttgggtctactggaagtaccttaccttagcctataagggagct
cttgtgccattagtgttgcttgcgcagattcttttccaagtacttcaaattgggagcaat
tactggatggcatgggctgctcccgtttcaaaggacgttgagcctccagtgagcatgtca
acactgatatatgtctatatcgctttggccgttggaagctcattctgcgtcctcttaaga
gcactgtttcttgtaacggcttcatacaagacagcaactctgttattcaacaagatgcac
atgtccatatttagagctcctatgtcattctttgattccactccaagtgggcgcatcttg
aatagagcttcaactgatcaaagcgaagtggacaccagcatcgcttaccagatgggctct
gttgcatttgctatcatacaacttgttggaattattgctgtgatgtctcaggttgcatgg
caggtctttgttgttttcattcctgtagttgcagcgtgtttctggtatcagagatactac
attgatacagccagggagctgcaaaggctagtaggtgtttgcaaagctcctatcatacag
cattttgcagaatcgataacaggatcgactaccatcagaagtttcggcaaggaaaatcag
tttgtatcagcaaatagccatctaatggatgcctactctcgaccgaaattctacaatgct
ggagcgatggagtggctttgctttcgcctggatgtgctgtcatctcttacatttgccttc
tctttgatatttttgatcaatctgccacccggtatcatcgatccagggattgctggtctt
gcagtcacatatgggcttaatctgaacatgctccaagcatgggttgtctggagcatgtgc
aatttggagaataagattatatcagtagagagaattctgcaatatatgagcattcgtgaa
gagcccccgctttccatgtcagaagataagctggctcatgactggccatctcaaggagaa
attcagctccatgacctccatgtgaaatatgccccacagctgccatttgttctgaaggga
cttacagtcacatttcctggaggcctgaaaactggtattgttggaagaacaggaagtggc
aaatcaaccctcatacaggcccttttccgtattgtggacccaactatcggccagatacta
atagatggcgtcgacatttgcaccattggtctgcatgatctgagatctagattgagcatc
attcctcaagaaccaaccatgtttgagggtactgtaagaagcaaccttgaccctcttggg
gaatacactgacaatcaaatctgggaggccttggattgctgtcagctaggtgatgaggtt
aggaagaaggagctgaagcttgactcaccagtgatagagaacggcgagaactggagcgtg
ggtcagcgtcagctcgtgtgccttggtagggtaatcctgaaacggggcaagatcctcgtc
ctggacgaagccaccgcctcggtggacaccgcaacggacaacctgatccagaagacgctc
cggcagcagttctccgaggcgacggtcatcacgatcgcgcacaggatcacgtccgtcctc
gacagcgacatggtcctgctcctcgacaacggtgtggccgtggagcgcgacacgccggcc
aggctgctggaggacaagtcgtcgctcttctcaaagctcgtcgcggaatacacgatgaga
tcgacgcacgcgtag

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