Panicum virgatum (switchgrass): 120705844
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Entry
120705844 CDS
T07260
Name
(RefSeq) phospholipase D alpha 1-like
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00564
Glycerophospholipid metabolism
pvir00565
Ether lipid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
120705844
00565 Ether lipid metabolism
120705844
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120705844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120705844
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
120705844
Membrane trafficking [BR:
pvir04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
120705844
Endosome - Golgi transport
Others
Others
120705844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLD_C
PLDc
PLDc_2
C2
Motif
Other DBs
NCBI-GeneID:
120705844
NCBI-ProteinID:
XP_039846307
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All DBs
Position
5K:5268355..5272421
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AA seq
812 aa
AA seq
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MAQILLHGTLHVTIFEAESLSNPHRASGGAPKFIRKLVEGIEDTVGVGKGTTKIYATIDL
EKARVGRTRMISNEPVNPRWYESFHIYCAHLAADVIFTVKIDNPIGASLIGRAYLPVRDL
LNEGEIDKSLEICDENREPIGDSKIHVKLQYFDVANDRNWARGVRSTKYPGVPYTFFSQR
QGCKVTLYQDAHVPDNFIPKIPLADGKNYEPHRCWEDIFDAISNAQHLIYITGWSVYTEI
TLVRDTNRPKPGGDVTLGELLKRKASEGVRVLMLVWDDRTSVGLLKRDGLMATHDEETAN
YFQGSDVNCVLCPRNPDDSGSFVQDLQISTMFTHHQKIVVVDHEMPNQGSQQRRIVSFVG
GIDLCDGRYDTQYHSLFRTLDTAHHDDFHQPNFGTASIKKGGPREPWHDIHSRLEGPIAW
DVLYNFEQRWRRQGGKDLLVRLRDLSDIIIPPSPVMFPEDRETWNVQLFRSIDGGAAFGF
PETPEEAARAGLVSGKDQIIDRSIQDAYIHAIRRAKNFIYIENQYFLGSSYGWKPEGIKP
EDIGALHLIPKELSLKIVSKIEAGERFIVYVVVPMWPEGVPESGSVQAILDWQRRTMEMM
YTDITQALQAKGIVANPKDYLTFFCLGNREVKQEGEYEPEEQPEPDTDYSRAQEARRFMI
YVHTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAYQPYHLATRQPARGQIHGFRMA
LWYEHLGMLDDVFQRPESMECVQKVNKIAEKYWDMYSSDDLEQDLPGHLLSYPIGIDSEG
NVTPMPGMEFFPDTRARVLGTKSDYLPPILTT
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcttgctccacggcacgctccacgtcaccatcttcgaggcggagtcgctc
tccaacccgcaccgcgcatccggcggcgcccccaagttcatccgcaagcttgtggagggg
atcgaggacaccgtgggtgtcggcaaaggcaccaccaagatatatgccaccattgatcta
gagaaagcccgggttgggcgtacccggatgatctccaacgagcccgtcaatcctcgctgg
tacgagtcgttccacatctactgcgcccacctcgccgccgatgtcatcttcaccgtcaag
atcgacaaccccattggggcgtcgctcattgggagggcttacctgcctgtccgggacctc
ctgaatgagggggaaatcgataaatctcttgaaatctgtgatgagaaccgtgagcctatt
ggtgacagcaagatccatgtcaagcttcagtactttgatgttgccaatgaccgcaactgg
gcaagaggtgtccggagcaccaagtatcctggtgttccttacacctttttctcacagaga
cagggatgtaaggttactttataccaagatgctcatgtcccagacaactttattcccaag
atcccgcttgctgatggcaagaactatgagccacacagatgctgggaggatatctttgat
gccataagcaatgctcaacacttgatttacatcaccggctggtctgtgtacaccgagatc
accttggttagggacaccaacaggccgaaacctggaggcgatgttactcttggggagttg
ctcaagaggaaggctagtgaaggtgtccgggtcctcatgctagtgtgggatgataggact
tcagttggcttgctgaagagagatggcttgatggccacccatgatgaggagactgcaaat
tacttccaaggctcggatgtcaactgtgttctgtgccctcgcaaccctgatgactctggc
agctttgttcaggatctgcagatatcaactatgttcacacaccatcagaagatagtagtc
gtcgaccatgagatgccaaaccagggctcccagcaaaggaggatagtcagcttcgttggt
ggtattgacctctgtgatggaagatatgatacacagtatcactccttatttaggacactt
gatactgcccatcatgatgatttccaccagcctaactttgggactgcgtcaatcaagaaa
ggtggtccaagagagccatggcatgatattcattcacggctggaagggccaattgcttgg
gatgtcctttacaactttgagcagaggtggaggaggcagggtggtaaggacctccttgtt
cgtctcagggatctttctgacattattattcccccttctcctgtgatgttcccagaggac
agagaaacatggaatgtccagctcttcagatccatcgatggtggtgcggcttttggcttc
cccgagactcctgaggaagctgctagagctgggcttgtgagtggaaaggatcaaatcatc
gacaggagtatccaggatgcatacatacatgccattcggagggcaaagaacttcatctac
attgagaaccagtacttccttggaagttcatatggctggaagcctgagggcatcaagccg
gaagatattggtgctcttcacttgattccgaaggagctttcattgaagattgttagcaag
attgaagctggggaacgatttattgtttatgttgtggtgccaatgtggcctgagggtgtc
ccagagagtggttctgttcaggcaatccttgactggcaaaggagaacaatggagatgatg
tacactgacatcacacaagctctccaggccaagggaattgttgcaaaccccaaggattac
ctcaccttcttctgcctaggtaaccgagaggtgaagcaggagggggagtatgaacctgag
gaacaaccagaacctgacactgattacagccgggctcaggaggccaggaggttcatgatc
tacgttcacaccaaaatgatgatagttgacgatgagtacatcatcatcggttccgccaac
atcaaccagaggtccatggatggtgccagggactctgagattgccatgggtgcataccag
ccgtaccacctggcaaccaggcagcctgcccgtggccagatccatggcttccggatggcg
ctgtggtacgagcacctgggcatgctggacgatgtgttccagcgcccggagagcatggag
tgcgtgcagaaggtgaacaagatcgctgagaagtactgggatatgtactcgagcgatgac
ctggagcaggacctcccgggccacctcctcagctaccccattggcattgactctgaaggc
aacgtcaccccgatgccagggatggagttcttccccgacacccgtgcccgtgtcctcggc
accaagtcggattacctcccacccatcctcaccacatag
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