Panicum virgatum (switchgrass): 120705861
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Entry
120705861 CDS
T07260
Name
(RefSeq) galactinol--sucrose galactosyltransferase-like
KO
K06617
raffinose synthase [EC:
2.4.1.82
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00052
Galactose metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
120705861
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.82 galactinol---sucrose galactosyltransferase
120705861
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Gene cluster
GFIT
Motif
Pfam:
Raffinose_syn
Motif
Other DBs
NCBI-GeneID:
120705861
NCBI-ProteinID:
XP_039846330
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Position
5K:5400842..5404548
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AA seq
785 aa
AA seq
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MAPNLSKAKPDLLGDAAAPVEGLKAPSRFTLKGKDLAVDGHPFLLDVPANIRLTPASTLV
PAAAAGGSFLGFDAPAAKSRHVVPVGRLHGTRFMSIFRFKVWWTTHWVGDSGRDVENETQ
LMVLDRSGSSAGGGRPYVLLLPIVEGAFRACLESGKVDDYVDMVVESGSSAVRGAAFRSS
LYLHAGDDPFELVREAVRVVRAHLGTFRTMDEKTPPPIVDKFGWCTWDAFYLKVHPEGVW
EGVRRLAEGGCPPGLVLIDDGWQSICHDDDDPASGAEGMNRTSAGEQMPCRLIKFQENHK
FREYKQGGMGEFVREMKAAFPTVEQVYVWHALCGYWGGLRPGAPGLPPAKVVAPKLSPGL
QRTMEDLAVDKIVNNGVGLVDPKRAGELYEGLHSHLAASGIDGVKVDVIHLLEMLCEEYG
GRVELAKAYFSGLTESVRRHFGGNGVIASMEHCNDFMLLGTEAVALGRVGDDFWCTDPSG
DPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAAFHAASRAVSGGPIYVSDS
VGQHDFALLRRLALPDGTILRCEGYALPTRDCLFADPLHDGRTVLKIWNVNRFAGVVGAF
NCQGGGWSPEARRNKCFSEYSVPLAARASPADVEWKSSGKGPGVSVKGVSQFAVYMVEAR
KLQLLRPDEGVDLTLAPFTYELLVVAPVRVISPERAVKFAPIGLANMLNTAGAVQAFETK
KDSSGVTAEVAVKGAGQMVAYSSARPRLCWVNGEEAEFAYKDGMVTVDVPWSGSSSKLCR
VEYVY
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaacctcagcaaggccaagccggacctgctcggcgacgcggccgcccccgtc
gagggcctcaaggcgccgtcgcgcttcacgctcaagggcaaggacctcgccgtcgacggc
cacccgttcctgctcgacgtgccggccaacatccgcctcaccccggcgtcgacgctggtg
cccgccgccgcggcgggcggcagcttcctcggcttcgacgcgccggcggccaagagccgg
cacgtggtgcccgtcggcaggctccacggcacccggttcatgagcatcttccgcttcaag
gtgtggtggacgacccactgggtgggcgacagcggccgcgacgtggagaacgagacgcag
ctgatggtgctcgaccgctccggctccagcgccggcggcggccgcccgtacgtgctgctg
ctccccatcgtcgagggcgccttccgcgcctgcctcgagtccggcaaggtggacgactac
gtggacatggtggtggagagcgggtcctcggcggtgcgcggcgccgcgttccggagctcc
ctgtacctgcacgccggcgacgacccgttcgagctcgtgcgggaggccgtgcgggtggtc
cgcgcccacctcggcacgttccggaccatggacgagaagaccccgccgccgatcgtggac
aagttcgggtggtgcacgtgggacgccttctacctcaaggtccacccggagggcgtgtgg
gagggcgtccgccgcctcgccgagggcgggtgcccccccgggctggtgctcatcgacgac
ggctggcagtccatctgccacgacgacgacgacccggcgtccggcgccgagggcatgaac
cgcacctccgccggcgagcagatgccctgccggctcatcaagttccaggagaaccacaag
ttccgggagtacaagcagggcgggatgggcgagttcgtgcgggagatgaaggcggcgttc
ccgaccgtggagcaggtgtacgtgtggcacgcgctctgcgggtactggggcggcctccgc
cccggcgcgccgggcctgccgccggccaaggtggtggcgccgaagctctccccgggcctg
cagcgcaccatggaggacctcgccgtcgacaagatcgtcaacaacggcgtcgggctcgtg
gaccccaagcgggcgggcgagctgtacgagggcctgcactcccacctcgcggcatccggc
atcgacggcgttaaggtcgacgtcatccacctgctggagatgctgtgcgaagagtatggc
gggcgcgttgagctggccaaggcctacttctccggcctgacggagtcggtgcgccggcac
ttcggcggcaacggcgtgatcgcgagcatggagcactgcaacgacttcatgctgctgggc
acggaggccgtcgcgctgggccgcgtcggcgacgacttctggtgcaccgacccctccggc
gaccccaacggcaccttctggctgcagggctgccacatggtgcactgcgcctacaactcg
ctgtggatgggcaacttcatccacccggactgggacatgttccagtccacgcacccctgc
gcggcgttccacgccgcctcccgcgccgtctccggcgggcccatctacgtcagcgactcg
gtgggccagcacgacttcgcgctgctccgccgcctcgcgctccccgacggcaccatcctc
cggtgcgagggctacgcgctgcccacgcgcgactgcctgttcgccgacccgctccacgac
ggccgcaccgtgctcaagatctggaacgtgaaccgcttcgccggcgtcgtcggcgccttc
aactgccagggcggcgggtggagccccgaggcgcgccggaacaagtgcttctccgagtac
tcggtgcccctcgccgcgcgcgcctcgccggccgacgtcgagtggaagagcagcggcaag
ggccccggcgtcagcgtcaagggcgtctcccagttcgccgtgtacatggtcgaggccagg
aagctgcagctcctgcgccccgacgagggcgtcgacctcaccctcgcgcccttcacctac
gagctcctcgtcgtcgcccccgtgcgcgtcatctcgccggagcgcgccgtcaagttcgcg
cccatcggcctcgccaacatgctcaacaccgctggcgccgtgcaggcgttcgagaccaag
aaagactcgagcggcgtcaccgccgaggtggccgtcaagggcgcggggcagatggtggcg
tactcgtcggcgaggcccaggctgtgctgggtgaacggcgaggaggccgagttcgcctac
aaggacggcatggtcaccgtcgacgtgccgtggtcggggtcctcgtccaagctctgtcgc
gtcgagtatgtctactga
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