Panicum virgatum (switchgrass): 120705865 Help Entry 120705865         CDS       T07260                                  Name (RefSeq) protein RST1-like   KO K27498   focadhesin Organism pvir  Panicum virgatum (switchgrass) Brite KEGG Orthology (KO) [BR:pvir00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pvir03019]     120705865 Messenger RNA biogenesis [BR:pvir03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      120705865 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DUF3730 Motif Other DBs NCBI-GeneID:  120705865 NCBI-ProteinID:  XP_039846334 LinkDB All DBs Position 5K:5498899..5517552 Genome browser AA seq 1828 aa AA seqDB search MASAAASSAAALSRLADRTRVPDPTLQRHAVAAFFRHLLSFPAPLPEAAHDAASVLLASP HPAVAAHAAASVARLAASRPDLLPPGRALPLLLAPLAASPSPRLASCFVKAVSALAACAL RSGSRFRPHDHPFVQALASGADGARAELARQAARMVAEGLDGIVGFLRPFVMFSVVRKGD AAFARDLIGALAAAATAAGKAGVAIPVLKLLEESMLHFGRGDDQEMWQWLSSAECLVGAH VVLLRKLVHAQMPTYDAQASGAMLMETLLSQCLFHKKILGITSTLLGLSKHLFSVQKDLG LCYVPEISGVLSSLSHSLSGLEFEHEQLVGLKLLAFLIEWKHENVLEQKEQKHCLSEELL CVMAVINLAISPSKSVKAVVHHILSRFSSLVLDMPATHSSEQQDISTDYHISKPALILPK LLHYIWSQPSSAGFIFMKQTATKVSPESGRNYLEARYWTDQLNDYLTALRREKLTLDGLS SKKTSTVAISSLISSVACVLVMHPKLGTSAAESLAMLGASDPRLGMPLFVVILFYIKILC NNNNFSTEISLSLIESLPSLAIHGFVLPLALQWISPMLNRDTNPVLYAIAVRLLCKIWIV TDWAFPNLQAIMDPENISNFISDREISMSVASSIRDVCKHNPDRGVDLILSVSLCIESRD SVVQALGLEGLSYLCEADVVDFYTAWKVISKELLDYSVEPAVAHSLCVLLRCGAMDAEAY SGISNNLIGILWSIGTSKKNDSKSLWVKARETAFLSLSHYKVSLIQDAIPDFWKRNYEFF TNEDNLAVLNAMENLQDEIVKFEHINRRRVSTDKRVAVHKFEKLLDVFPQAVFKGKSTHH QLPGAALLTLNFTPKDILNEGKSKGLPRVHAAFEQAFTEIAESLYISRNIEVALLALHSW KSFVSNWMQAVVALLDIKESSKLNKALKAANDIFKILCDHASVSTPRVAVNIALVIGALC LIVPPTAHLVISSASDFLLKWLFQYEHEHQQWSAALSLGLIFNCFHPTDKKSRFQVINGL LEVISKTESCLAKGACGLALGYACQGLLTRAHNASDSEVDATTELNERASIEDILRASVS SLIQLCPSSCCSLKKLNIYGIDSMEGMEENSDRFNDDPWAIAGLVLGLGNSVFALYRLGA YGTVTEIKDILMSWIPDVNSSCELFDEMNSVSLCIGSCLALPSVVAFCQRVDLLNEDLDA LFNRYTSLASELLNLNKSGIIFQNLLMAICIGAGSLLSFILDDGVHAMEPSAVKKLLDTL RHIYTHPFPPLVHLGGMFGVVNACGAGAGDLTGMCSKLMTSQIKHEESSLVRGPLLASPV GETLSTSMVQEIYLLAKDAEDKHIQDSAAWAISFLRSRWLLKNLIVYDKNGSNRSSDDPS QASSFSEQSLVWNLSRWLNDLKLEKPFDMVPVSTVGTVLKCLSKAPRLPSTDWGVIVRRC MKVEAQILYKPTNQQDLKLLREACLHFTLAHATHISPLLQFLDDLTDILRFRRLEINVQS ILLQHLSHLMKLFSDSRLDKLYEDLTEYLYSSTSSYLDYSCEQKSMIRMSFWEGICKCLV EVVSEESGGFSFTKKCLECLLPLLTLQNDGQPEYMDEWSSAIMCLTNAQKSWLGDMLQVR NAALVTEEERVDVAKKIIIRARLCAAGCGSVHDLGNIKMMILCTKADGVWWNVLVEIAAA INSDENSIKRQWLLDALEIGCVTAHPSTVLRFVGLLCDSCCIYMPLLIVNSRNVLSDLPV TLPSFLSSSIWDDFRDIVADKLWLLTTHIYTWAEQLAYGNDLTGHAHIHRSEAEMATFLA NILRSTCIAAEDYLTVDKQLKLANLESL NT seq 5487 nt NT seq  +upstreamnt  +downstreamnt atggcctccgccgccgcctccagcgcggcggcgctctcccgcctcgccgaccgcacccgg gtaccggaccccacgctgcagcgccacgcggttgcggccttcttccgccacctcctctcc ttccccgcgcccctccccgaggccgcccacgacgccgcctccgtcctgctcgcctcgccc caccccgccgtcgccgcgcacgccgcggcctccgtcgcccgcctcgccgcctcccgcccc gacctcctgcccccgggccgcgccctcccgctcctcctcgcgcccctcgcggcctccccc tcgccccggctcgcctcctgcttcgtcaaggctgtctccgcgctcgcggcctgcgccctc cgctctggctcccgcttccggccccatgaccacccattcgtccaggcgctcgcgtcgggg gcggacggcgcgcgcgcggagctggcgcgccaggcggccaggatggtcgccgaggggctg gacgggattgtagggttccttaggccgttcgtgatgttctccgtggtgaggaagggggac gccgcattcgcgagggatttgatcggcgcactggccgcagcggccacagcagcggggaag gctggtgtcgcgatcccggtgctgaagttgctcgaagagagcatgctgcatttcggacgc ggggatgatcaggaaatgtggcagtggcttagttctgcggagtgcttggttggagctcat gtggtgttgttgaggaagttggttcatgcccaaatgccaacatatgatgctcaagccagt ggtgcaatgttgatggaaacactcctgtcacaatgtttatttcataaaaaaattctggga attacatctacacttcttgggttatcaaaacatttattctcggtgcaaaaggaccttgga ttatgctatgtacctgagatttctggtgttcttagttctctttctcactctctcagtggg ctggagtttgaacacgaacagctagttggcttgaaacttctggcctttttgattgaatgg aaacatgaaaacgtacttgagcagaaagaacaaaaacactgcctcagcgaggagcttctc tgtgttatggcagtaatcaacctcgcaatttctccttctaagtctgtgaaagcagtggtg catcatattctgtcaaggttcagctcgctcgttttagacatgcctgccactcattcatca gagcaacaagatatttcaacggactaccacataagcaaacctgcacttattcttcctaaa cttctgcattatatatggtctcagccatcttcagcaggcttcatttttatgaagcaaaca gctaccaaggtttcacctgaatctggtcggaattatttggaagcaaggtattggactgat caactaaatgactatctgacagcccttcgcagagaaaagcttacattggatggtttgtct tcaaaaaagacatctacagtagcaatatcatctctgataagctctgtagcatgtgttttg gtaatgcatccaaaacttggtacttctgctgcagagtctttggcaatgcttggtgcatca gacccaagattgggtatgccattgtttgtagttatcctcttctatatcaagatcctatgc aacaacaataatttttcaacagagatctcgctcagtttgatagagtcattgccatcactt gctatacatggttttgtgcttccactcgctctgcaatggatatcgccaatgcttaacagg gacacgaatccggttctatatgctatagctgttcgattactctgcaaaatatggattgtc actgattgggcttttccaaacttacaagcaattatggatcctgaaaatatttcaaatttc atctctgacagagagatttccatgagtgttgcctcatcgatacgtgatgtttgcaaacac aatccagatcgaggagttgatttaatactatctgtctcgttgtgtattgagagtcgtgat tctgtggttcaagctcttggtctggagggcctctcgtatctctgtgaagctgatgtggtc gatttctatacggcctggaaggttatatcaaaggagctgcttgattattccgtcgaacct gctgttgctcacagtttgtgtgttctgctgagatgtggagcgatggatgctgaggcatat tctggaatatctaataacctgataggaatattatggagcattgggacatctaagaaaaat gattccaaatctctctgggttaaagcaagagaaactgcttttctctccttgtcccactac aaggtctcgcttattcaagatgctattcctgatttctggaaacgaaactatgaattcttc actaatgaagataatctggcagttctcaatgccatggagaaccttcaagatgagatcgtc aaatttgaacatataaaccgtcgtagagtgagcactgataaaagagttgccgtccataaa tttgagaaactactggatgttttccctcaggccgtgtttaaaggaaagtcaactcatcat cagttgcctggtgctgctcttctaactcttaattttaccccaaaggatatacttaatgaa gggaaatctaagggtttgccaagagttcatgctgcttttgagcaagcattcacagaaatt gctgaatctttgtacatatcaagaaatatagaggttgctcttcttgcattgcattcatgg aagtcatttgtttccaattggatgcaagcagttgttgctttgcttgacattaaagagtca tcaaagttgaacaaagctttaaaagctgctaatgatatatttaagattttgtgcgatcac gcttcagtatctactcctcgagttgctgttaacattgctcttgtcattggagcactatgt ttgattgttccaccaactgcccatttggtaatatcttctgcatcagattttcttttaaaa tggctatttcaatacgagcatgagcaccagcagtggtcagcagccctatctcttggacta atattcaattgttttcaccccacggataaaaagagcaggtttcaggttattaatgggctt cttgaggttatctcaaaaactgaaagctgtcttgcaaaaggagcttgtggactggcatta ggctatgcttgccaaggtcttttaacgagagcacataatgctagtgattcagaagtagat gctactacagaactcaatgagcgtgcatcaattgaagatattcttcgtgcttcggtttct tcattgattcagctatgtccgtcctcatgttgttctctgaaaaaacttaatatatatgga atagactccatggaagggatggaagaaaatagtgatagattcaacgatgatccttgggct attgctggacttgttcttggtctgggaaattctgtttttgctctgtatagacttggagct tatggcactgttactgaaatcaaggacatattgatgtcatggataccggatgtcaattca agctgtgaattatttgatgaaatgaattcagtatcactttgtatcggctcatgtcttgct cttccttctgtcgtggctttttgccaaagagtggacttgttgaatgaggacttggatgca ctgttcaatcgctacacttctttagcttctgagctcctaaacctcaataaatctggaatt atctttcagaatttattgatggcaatctgtattggtgctggatctctcctatcttttata ctagatgatggagtgcacgctatggaacccagtgctgttaaaaagcttctagacactctc aggcatatatatacacatccatttcctccccttgttcatttgggaggcatgtttggtgta gtcaacgcttgcggtgcaggtgcaggggatcttactgggatgtgttcaaaacttatgact tcacaaatcaaacatgaggagtcatctttggtgagaggtcctttattggcaagccctgtt ggtgagactctttcaacatctatggtccaggaaatatatcttcttgctaaggatgctgag gataagcacatacaagattctgctgcgtgggccatttcatttcttagaagcaggtggttg ttaaagaatctgattgtttacgataaaaatggttcaaatagaagttctgatgatcccagt caagcttcaagtttttctgaacagagcttagtttggaacttaagtcgctggttgaatgat cttaagcttgaaaagccttttgatatggtgccagtaagtacagttggaacagttttaaaa tgtctttctaaagctcctcgattgccatctacagactggggggttattgtacggcggtgc atgaaagttgaagcgcagattctttataagccaaccaatcagcaagatctaaagttacta agggaagcatgcttacattttactctagctcatgctacccacataagtccccttctgcag tttttggatgatctgactgacatactcagattccggagattagaaataaatgtgcaatct attttgctccaacatttgtcacacctaatgaagctcttctcagattcaagattagataaa ctgtatgaggatttaactgaatacttgtattcctccacctcttcatacttggattactca tgtgaacagaaaagcatgataagaatgtcgttctgggaaggcatttgcaagtgcctggtg gaggttgtttctgaagaatctggtggcttctcattcactaaaaaatgccttgaatgcttg ttgcctctcttgactctccaaaatgatggtcaacctgaatacatggatgagtggtcttct gctatcatgtgtcttaccaatgcccagaaaagttggctgggtgatatgctgcaggttcgg aatgctgctttagtcactgaagaagaacgtgttgatgtggcaaaaaaaattatcatcaga gcaaggttgtgtgcggctggttgtggttcagtacatgatctgggtaatataaagatgatg atattatgtacaaaagcagatggtgtctggtggaatgtccttgtagagatcgctgcagct attaactctgatgaaaacagtatcaaaaggcagtggcttctggatgcattagagattggt tgtgttacagctcatccttcgacggtgctgcgctttgttggcctgctatgtgatagctgc tgcatctatatgcctcttctcatcgttaattcaagaaatgtactgagtgacttgcctgtc actctgccttcctttctctccagcagcatttgggatgatttcagggacattgttgcagac aagctatggttgttgaccactcacatctacacttgggcagaacaattggcttatggaaat gacctcactgggcatgctcatattcatagaagtgaagctgagatggctacttttctggcc aatattctgcgttcaacatgcattgcagctgaggactacttgactgttgataagcagctg aagcttgcaaacctagagtcactctga

DBGET integrated database retrieval system