Panicum virgatum (switchgrass): 120705873
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Entry
120705873 CDS
T07260
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120705873
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
120705873
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120705873
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
120705873
NCBI-ProteinID:
XP_039846341
LinkDB
All DBs
Position
5K:complement(5691547..5695272)
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AA seq
492 aa
AA seq
DB search
MVAVGGGGRRRRAWRWAMRAAASAVLWTAVVQLASIAGLFRPRVFADCGGGGAAGGGLGA
AAAGLAALAGEDSVAAKLSPPALVPKRIYKSNGYLRVTCNGGLNQMRAGICDMVTIARHL
NLTLVVPELDKKSFWADPSDFGDIFDVDHFISSLRDELMIVKELPLKLQLRTKKRLYSMP
PVSWSNETYYLKRILPLARKHKVIHFDKSDARLANNGLPIQLQMLRCRVNFEALRFTPQI
EALGKKLVSTLQRNGQFVVLHLRYEMDMLSFSGCTHGCSSKETEELTRMRYAYPWWKEKE
IDSEAKRLEGLCPLTPEEITLVLKALGFTKDTLIYIASGEIYGGERRLAALKAAYPKLVR
KEKILSPDELRPFQNHSTQMAALDYMVSLASDIFIPSYDGNMARVVEGHRRYMGFRKTIV
LDRKKLVELLDLFQGGALSWDEFSGAVKEAHKSRMGRPTERKIIPGQPKEEDYFYANPQE
CLGSNGGLRDVS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggtggccgttggcggaggggggcggcggaggcgggcgtggcggtgggccatgcgggcg
gcggccagcgccgtgctgtggacggcggtcgtgcagctcgcctccatcgccgggctgttc
cgcccgcgggtcttcgcggactgcggcggcggcggcgcggcgggaggcggactgggcgcc
gctgccgcgggactcgccgcgctcgccggcgaggacagcgtcgcggcgaagctctcgccg
ccggcgctcgtgcccaagagaatttataaaagcaatggttatctacgagtgacttgcaat
ggtggtctcaatcaaatgcgagctgggatatgtgatatggtgactatagcacgccatcta
aatctaacactagtggtccctgaactggacaaaaagtctttttgggccgatccaagtgat
tttggagatatttttgatgtggatcacttcattagttccctcagagatgagctgatgatt
gttaaagaactgcctttgaaactccagttaagaactaagaagagactatactcgatgcct
cctgtcagctggtcgaatgaaacatactacctgaagcggatattacctcttgcaaggaag
cacaaagtgatccattttgataaatcagatgctcgccttgcaaacaatggccttccgatt
cagctccagatgctgcgttgccgcgtaaactttgaggctttgagattcactccacagata
gaggcccttggcaaaaaacttgtctccaccctccagagaaatgggcaatttgttgtgctt
catttgcgctatgaaatggacatgctctccttttcaggctgcacacatggctgctctagt
aaagaaaccgaggagctcactagaatgagatatgcttatccatggtggaaagaaaaggag
atcgattctgaagcaaagaggcttgagggactttgccccctcacaccagaagaaattact
ctagttcttaaagctctaggatttacaaaagatacactgatatacattgcttctggtgaa
atttatggtggtgaaaggcgcttggctgcgctcaaggctgcataccctaaactagtgagg
aaggagaagattttatctcctgatgaattgcggccatttcagaaccattcgacccagatg
gcagcactggattacatggtttctttagcaagtgatattttcattcccagctatgatgga
aatatggcaagggttgttgaaggtcaccgcaggtatatgggttttcgcaagaccattgta
ttggacagaaagaagctcgttgaactcttggaccttttccaaggaggtgcactatcttgg
gatgaattctcaggtgcagtgaaggaggcacacaagagccgcatgggccgacctacagaa
agaaagatcatccctgggcagcccaaggaagaggactatttctatgcaaatcctcaagaa
tgccttggctccaatgggggattaagagacgtttcctga
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