KEGG   Panicum virgatum (switchgrass): 120705874
Entry
120705874         CDS       T07260                                 
Name
(RefSeq) autophagy-related protein 18d-like
  KO
K22991  WD repeat-containing protein 45
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120705874
Membrane trafficking [BR:pvir04131]
 Autophagy
  Other autophagy associated proteins
   Others
    120705874
SSDB
Motif
Pfam: PROPPIN BCAS3_WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WD40_Prp19 WD40 Beta-prop_WDR3_1st Beta-prop_IFT140_2nd Beta-prop_RSE1_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_WDR3_2nd Beta-prop_Vps41 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd WDR55 CFAP251_N Beta-prop_EML PEP5_VPS11_N Beta-prop_WDR36-Utp21_2nd Beta-prop_HPS5 WD40_Gbeta Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_ACSF4 Beta-prop_WDR19_2nd Beta-prop_IFT80_2nd DUF6817
Other DBs
NCBI-GeneID: 120705874
NCBI-ProteinID: XP_039846342
LinkDB
Position
5K:complement(5696822..5701617)
AA seq 417 aa
MSSQVSTSRGLLPPGKLGTYESPHVWPLSAPTGQPEAGRGDDQDVRLLSAAWNQDCGCFA
AGTSNGFRIFNCEPFKETFRRDLKSGGFGIVEMLFRCNILALVGGGSNVQYPPNKVMIWD
DHQSRCIGEFAFRSDVRAVKLAKDYIVIVLERKIYVYNFTDLKLLYQIDTLSNPKGLCCL
SHHSNTSVLACPGVHQGHVRVEHFGLKMTKTIPAHDSHISCMALTMDGLLLATASTKGTL
IRIFNTMDGTRLQEVRRGLDKAEIYSIALSPNVQWLAVSSDKGTVHIFSLRVRVAGEDAS
NEQRTLEGPRMDHQNSSSSIDPLVQTNTGSNASSSLSFMRGILPKYFSSEWSFAQFHLPE
VTRYIVAFGAQNTVMMVGLDGSFYRCSFDQVNGGQMLQKEYFRFLKSDTPPFRTSAT
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgagctcacaagtctccacatcacgggggttacttcccccgggcaagcttgggacatac
gagtctcctcatgtctggccgctgtcggcacctacaggccagcccgaagcaggtcgtggt
gatgaccaggatgtcaggctgctgtcggctgcttggaatcaggattgcggatgctttgct
gctggtaccagcaatgggttcaggatcttcaactgcgagcctttcaaggaaactttcagg
agggatcttaagagtggtgggtttgggattgtcgagatgctgtttcgttgcaacatactt
gctcttgtaggtgggggctccaatgtgcagtatccaccgaacaaggtgatgatctgggat
gatcaccagagccgttgcattggagagtttgccttccgctctgatgtccgggctgtaaaa
ttggcaaaggactacatcgtgattgtcctcgagaggaagatatatgtctacaacttcacc
gatttgaagctgctgtaccagattgacactctgtcaaatccaaaaggactttgctgcctc
tcccatcactccaatacttcagtcttggcatgccctggggtgcaccaggggcatgttcgg
gtggagcattttgggctgaagatgacgaagacgatcccggctcatgattcacacatctct
tgcatggcactgacaatggatgggctcctactggcaactgcaagcacgaagggcactttg
atcagaatattcaacacaatggatggcactcgcctacaagaggtacgcagaggacttgac
aaagcagaaatatatagcattgcgctgtcgcccaatgtgcagtggttggcagtgtccagt
gacaaaggaactgttcacattttctctctgagagtcagagttgctggggaggatgcaagc
aatgagcaacgcactcttgaaggtccacggatggaccaccagaactcttccagttctatt
gatcctcttgttcagacgaacactgggtccaatgcgagttcatcactgtctttcatgaga
gggatcttgccgaagtatttcagttcagaatggtcatttgctcagttccatttaccagaa
gtcacacgctacatagtagcctttggtgcacagaatactgtaatgatggttggcctggat
ggcagcttctacaggtgcagctttgaccaagtgaatggagggcagatgttgcagaaggaa
tatttccggtttttgaagtctgacaccccacctttcaggacctcagccacctga

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