Panicum virgatum (switchgrass): 120705919
Help
Entry
120705919 CDS
T07260
Name
(RefSeq) PHD finger protein ALFIN-LIKE 1-like isoform X1
KO
K26274
PHD finger protein ALFIN-LIKE
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120705919
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
120705919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alfin
PHD
PHD_NSD
C1_1
PHD_4
Zn_Ribbon_TF
PHD_ash2p_like
Motif
Other DBs
NCBI-GeneID:
120705919
NCBI-ProteinID:
XP_039846412
LinkDB
All DBs
Position
5K:6089975..6093638
Genome browser
AA seq
243 aa
AA seq
DB search
MGDAASGRGHVVYPPRSAEDIFKDYRARRSAILRALTHDVEDFYAQCDPEKENLCLYGYA
NEAWEVALPAEEVPTELPEPALGINFARDGMNRRDWLALVAVHSDSWLLSVAFYYAARLN
RNDRKRLFGMINELQTVFEVVSGARQQQSKERSSMDNGGRAKPSVKIENNGKASEDAYGE
DDSDHGETLCGTCGGIYSADEFWIGCDICERWYHGKCVKITPAKAESIKHYKCPSCSSKR
ARQ
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgggggatgccgcctccggccgcggccacgttgtctaccctccccgctccgccgaggac
atcttcaaggactaccgcgcccgccgctccgccatcctccgggccctcacccacgacgtc
gaggacttctacgcgcagtgcgatccagagaaggagaacctctgcctgtacgggtacgcg
aacgaggcctgggaggtggcgctgccggcggaggaggtgccaacggagctgccggagccc
gcgctggggatcaacttcgcgcgcgacggcatgaatcgccgcgactggctcgcgctcgtc
gccgtccactccgactcatggctcctctccgtcgctttctactacgctgctcggctcaat
cggaatgaccggaaacgtttatttggtatgattaacgaattgcaaactgtttttgaagtt
gtctccggtgcgagacaacaacaatctaaggagaggtccagtatggacaatggtgggagg
gccaaaccctcagtaaagatagaaaataacggaaaagcatcagaagatgcatacggagaa
gatgacagtgatcacggtgaaactctatgtggtacctgtggtggtatatacagcgcagat
gagttctggattgggtgcgacatctgcgagaggtggtatcacggcaagtgcgtcaagata
actcccgccaaggcagaaagcataaaacattacaagtgcccgagctgcagctccaagagg
gctaggcagtag
DBGET
integrated database retrieval system
