Panicum virgatum (switchgrass): 120705993
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Entry
120705993 CDS
T07260
Name
(RefSeq) probable bifunctional riboflavin biosynthesis protein RIBA 2, chloroplastic isoform X1
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00740
Riboflavin metabolism
pvir00790
Folate biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01240
Biosynthesis of cofactors
Module
pvir_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
120705993
00790 Folate biosynthesis
120705993
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
120705993
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
120705993
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Ortholog
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Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
SWM_repeat
Motif
Other DBs
NCBI-GeneID:
120705993
NCBI-ProteinID:
XP_039846497
LinkDB
All DBs
Position
1K:complement(38046513..38051332)
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AA seq
551 aa
AA seq
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MTALAPPSSSVAAALTRQPARFLKGCSVAKETKGSVCNLFTPNSNNAKVKSVGLRISSSL
KRDGGYPAGGASGNGDVLLPRSTSVRGQDHSVADPVLPTDSMVAPEILSANLARVADKFA
DEDTDTELDLDSPTEGFASIADAIEDIRQGKLVIVVDDESRENEGDLIMAASLVTSEAMA
FIVRHGTGIVCVSMKEEDLERLNLPLMVTGKENEEKLCTAFTVTVDAKEGTTTGVSAKDR
AKTVMTLASPDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAMLAGLPPVAVLCE
IVDDADGSMARLPKLRVFAERENLKIISIADLIRYRRKRDRLIERASVARLPLRWGNVRA
YCYRSVIDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGDQLAMSMEMIEK
AGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQILRD
LGVRSMKLMTNNPAKYSGLKGYGLSIAGRVPLLTPITSENRKYMETKRTKMGHVYGQANQ
ANDSNSAGEKH
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgcttgcgcctccgtcttcctccgtcgccgctgccctcacccgccaaccggcg
cggtttttgaaagggtgcagtgtcgccaaggagacaaagggctcggtttgcaacctcttc
actccaaattcaaataatgccaaagtaaaatcagtgggcttgagaatatcatcatccttg
aaaagggatggtggctatccagctggtggtgcctctgggaacggcgacgtgctattgcca
agaagtacttccgtacgtggccaggaccattcggttgctgaccctgtactcccgacagat
tccatggttgcgccagaaattctctctgctaatctggcacgtgttgcggacaagttcgca
gatgaagacacagacactgaacttgatttggatagcccgacagagggctttgcatctatt
gcagatgccattgaggatatacgacaaggaaaacttgtgattgttgttgatgacgagtca
agggaaaatgaaggagaccttataatggctgcttccttggttacctcagaggctatggct
tttatagtaaggcatgggactggaattgtgtgtgtcagcatgaaagaagaagatctggaa
agactgaaccttccattgatggttactgggaaagaaaatgaggagaagctatgcactgct
ttcactgtcacagtggatgcgaaagagggcacaacaactggggtatctgccaaggacagg
gcaaaaacagtcatgactcttgcatctcctgactctaagcctgaggacttcaatcgcccc
ggtcatattttccctttgaaatacagagaaggaggtgttctgaaacgagctggacacacc
gaggcttctgttgaccttgccatgctggctggattacctcctgttgctgtcctttgtgag
attgtggatgatgcagatggctccatggctcgcctaccaaaacttcgtgtgtttgctgaa
agggagaatttgaagattatatctattgctgacttgattagatataggaggaaaagggac
aggctaattgaacgtgcttctgttgcacgcttgcctttgagatggggcaatgttcgtgcc
tattgctacagatctgtcattgatggaattgaacatattgcaatggtgaaaggcgagatt
ggtgatggtcaagatattttggtgagggttcactctgagtgcctcactggagacattttt
ggatctgcaaggtgcgattgtggtgaccagcttgccatgtcaatggagatgattgagaag
gctggaaggggtgtattagtttaccttcgtggacatgaaggaaggggtattggtctgggt
cacaagctccgtgcttacaacttgcaagatgacgggcgtgacactgtggaagctaatgag
gagctagggcttcctgttgattcacgggaatatgggattggtgcacagatattacgggat
ctaggagtccgttcaatgaagttgatgaccaataaccctgcaaagtatagcggcctcaag
ggttacggattaagcattgcgggcagggtgcccttgctgacgccaataaccagtgagaat
aggaagtacatggagaccaaaagaacaaagatggggcatgtatatggacaggctaaccaa
gcaaatgacagcaacagcgcaggagagaagcactaa
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