Panicum virgatum (switchgrass): 120706034
Help
Entry
120706034 CDS
T07260
Name
(RefSeq) probable zinc metalloprotease EGY2, chloroplastic isoform X1
KO
K25380
zinc metalloprotease EGY, chloroplastic [EC:3.4.24.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120706034
Peptidases and inhibitors [BR:
pvir01002
]
Metallo peptidases
Family M50: S2P protease family
120706034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M50
Motif
Other DBs
NCBI-GeneID:
120706034
NCBI-ProteinID:
XP_039846531
LinkDB
All DBs
Position
5K:7586094..7590544
Genome browser
AA seq
546 aa
AA seq
DB search
MSSSSPPSRASAAAYGCFHRLLLASATVPARSGCSERARSLTMALRCLPIAGRRLRSRRV
ACQAMTETDPEGNGDDEEKEVFGDDAPSPSADSVAEVNGPAESGSNIDNKKDETTNAELL
RSSDTVQNMDGDATTTNHTQENVEVVEVASGSPLPGMKQQLDDAERIPKATIDIMKDQVF
GFDTFFVTSQEPYEGGVLFKGNLRGKAAKSYEKITNRLENKFGDQYKLFLLVNPEDEKPV
AVIIPRQTLQPETTAVPEWFAAASFGLVTIFTLLLRNVPVLQNNLLSTFDNLELLKDGLS
GALVTGLIIGVHEIGHILAARESGIKLGVPYFVPSWQIGSFGAITRIVNIVRNREDLLKL
AAAGPLAGFSLGFVLLLLGFILPPSDGLGLVIDPTVFHESFLVGGLAKLLLGDALKEGTQ
LSINPLVLWAWAGLLINAINSIPAGELDGGRIALAMWGRKVSSRLSSLTIGLLGIAALFN
DVAFYWVVLIFFLQRGPIAPLSEEITDPENNYIGIGIAILLFGLLVCLPYPFPFDLSQLA
DIDFDL
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctcctcgccgccgtcgcgggcgtccgccgcggcgtacgggtgcttccaccgc
ttgcttcttgcgtcggccactgttccggcgaggagcgggtgctccgagcgcgcgcgaagc
ctcacgatggcgctccgctgcctcccgattgccgggcgcaggctgaggagtcggagggtt
gcgtgccaagcgatgacggagaccgatcccgaaggcaatggcgacgatgaggagaaagaa
gtgtttggagatgatgctccatcaccttcggctgatagtgttgcagaagtaaatgggcct
gcagaaagtggctccaatatagacaataagaaagatgaaaccacgaatgcagaactgctg
aggtccagcgatacagttcagaacatggatggagatgccactactaccaatcatacgcaa
gagaatgtggaagttgttgaagtcgctagcggctctccattgcccggaatgaagcaacag
cttgatgacgctgaaaggattcctaaagctacaatagacattatgaaggatcaagttttt
gggtttgacacattttttgtgacaagtcaggagccttatgagggtggagtattgttcaaa
gggaatttgcgtggtaaagctgccaagagttacgagaaaatcacaaatcggctagagaac
aaatttggtgatcaatataagctttttcttctcgtgaacccagaggatgagaagccagtt
gcagtaattatacccagacagacattacagcctgaaactacagctgtcccagaatggttt
gctgcggcatcatttggattagttaccatcttcactttgctgcttcggaatgtacctgtt
ctgcagaacaatttgctatcaacattcgacaaccttgaactgttaaaagatggattatct
ggtgccctggtaaccgggctaataataggcgtccatgaaattgggcatatccttgctgct
agggaaagtggaatcaagcttggagtaccatatttcgttcctagctggcagataggatct
tttggtgccattaccaggattgtcaacattgtccgcaaccgtgaggacctattgaagcta
gcagccgctggaccactggcagggttctcccttggatttgttcttttgttgttgggtttc
atcttacctccaagtgatggccttggccttgtgatagatccaactgtctttcatgagtca
tttcttgttggtggtctagcaaagcttcttcttggggatgctctgaaagaaggaacacag
ctatcaataaacccacttgttttatgggcgtgggctggtctactgatcaacgctatcaat
agcattcctgctggagagcttgatggtgggcgaatagcacttgcaatgtggggaagaaag
gtatcatctcgactcagcagccttaccattggactgctcgggatcgcagctctcttcaat
gacgtggccttctactgggtggtgttgatcttcttcctgcagagaggcccaatcgctcct
ctctccgaggaaataacagaccctgaaaacaactacatcggcatcggcatcgctattttg
ctctttgggcttctggtctgcctgccctacccattcccctttgacctatcacaattggcc
gatattgattttgacttgtga
DBGET
integrated database retrieval system
