Panicum virgatum (switchgrass): 120706039
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Entry
120706039 CDS
T07260
Name
(RefSeq) protein SGT1 homolog
KO
K12795
suppressor of G2 allele of SKP1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120706039
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Motif
Pfam:
SGS
CS
TPR_19
TPR_2
TPR_16
ANAPC3
TPR_1
TPR_8
TPR_14
TPR_9
TPR_BSK1_C
TPR_11
Motif
Other DBs
NCBI-GeneID:
120706039
NCBI-ProteinID:
XP_039846543
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Position
5K:7614418..7615907
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AA seq
416 aa
AA seq
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MYPRCQDSCSYRARTNPWARLRAANTRRRGPEPTTPATNKISGNTRPIESSLDQSLADFA
AAPAAMAAPTPAELEHKATEAFFDDDFALAAALYTQAIAAGPPTAARYADRAQAHAKMGD
FAAAAADAARAAELDPAMPRAHLRRAHACVKLEQYDDARAAAEAGAALAPGDARFAKLMS
EIDAKAPKPMETEASAAVAAPASAEKPKYRHDYYNSAAEVVVTVFAKGVAPEHVAVDFGE
QLLSVSVEVPGEAPYHLQPRLFGKIVPDKCRFAVLSTKIEVRLAKAEPGTTWPSLEFTGK
PRLATVAPPRGSSSSSGGGGGAQRPSYPSSRGRKDWDRIEAEVKRAEKEEKLDGDAAANK
FFQDIFRNADEDMRRAMTKSFQESNGTVLSTNWKDVGAKKIEPSPPEGMDLRKWEY
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtacccaagatgccaggactcgtgttcctatcgtgcacgaaccaacccgtgggcgcgc
ctgcgggctgcaaatacgcgacgtcgtggtcccgagcccacgaccccagcgaccaacaaa
atctcgggaaacacgcggcctatcgaatcgtccctggatcaaagcctcgccgacttcgcc
gccgcacccgctgccatggcggcgccgacgcccgcggagctggagcacaaggcgacggag
gccttcttcgacgacgacttcgccctcgccgccgcgctctacacgcaggccattgccgcg
ggtccccccaccgcggcgcgctacgccgaccgcgcccaggcccacgccaagatgggagat
ttcgccgcggccgccgcggacgccgcccgcgccgccgagctcgaccccgccatgccccgg
gcgcacctccgcagggcccacgcctgcgtcaagctggagcagtacgacgacgcccgggcc
gccgccgaggccggcgccgccctggcccccggcgacgcgcggttcgccaagctgatgagc
gagatcgacgccaaggcgcccaagccgatggagaccgaggcgagcgccgccgtcgccgcg
ccggcttctgcggagaagcccaagtacagacacgactactacaacagcgcggcggaggtg
gtggtgaccgtgttcgccaagggcgtggcccccgagcacgtcgcggtggatttcggcgag
cagctgctgagcgtctccgtcgaggtccccggcgaggcgccgtaccacctgcagccccgg
ctgttcggcaagatcgtccccgacaagtgccggttcgccgtcctctccaccaagatcgag
gtccgcctcgccaaggccgagccggggacgacgtggccgtcgctggagttcaccggcaag
cccaggctcgccaccgtggcgccaccacgcgggagcagctcctcctccggcggcggcggc
ggcgcccagcggccgagctacccgtcgtccaggggccgcaaggactgggacaggatcgag
gcggaggtgaagagggcggagaaggaggagaagctggacggcgatgcggctgccaacaag
ttcttccaggacatcttccgcaacgccgacgaggacatgcggcgcgccatgaccaagtcg
ttccaggagtccaacggcacggtgctgtcgaccaactggaaggacgtcggcgccaagaag
attgagcccagcccgccggaaggcatggatctgcgcaagtgggagtactga
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