KEGG   Panicum virgatum (switchgrass): 120706039
Entry
120706039         CDS       T07260                                 
Name
(RefSeq) protein SGT1 homolog
  KO
K12795  suppressor of G2 allele of SKP1
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04626  Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04626 Plant-pathogen interaction
    120706039
SSDB
Motif
Pfam: SGS CS TPR_19 TPR_2 TPR_16 ANAPC3 TPR_1 TPR_8 TPR_14 TPR_9 TPR_BSK1_C TPR_11
Other DBs
NCBI-GeneID: 120706039
NCBI-ProteinID: XP_039846543
LinkDB
Position
5K:7614418..7615907
AA seq 416 aa
MYPRCQDSCSYRARTNPWARLRAANTRRRGPEPTTPATNKISGNTRPIESSLDQSLADFA
AAPAAMAAPTPAELEHKATEAFFDDDFALAAALYTQAIAAGPPTAARYADRAQAHAKMGD
FAAAAADAARAAELDPAMPRAHLRRAHACVKLEQYDDARAAAEAGAALAPGDARFAKLMS
EIDAKAPKPMETEASAAVAAPASAEKPKYRHDYYNSAAEVVVTVFAKGVAPEHVAVDFGE
QLLSVSVEVPGEAPYHLQPRLFGKIVPDKCRFAVLSTKIEVRLAKAEPGTTWPSLEFTGK
PRLATVAPPRGSSSSSGGGGGAQRPSYPSSRGRKDWDRIEAEVKRAEKEEKLDGDAAANK
FFQDIFRNADEDMRRAMTKSFQESNGTVLSTNWKDVGAKKIEPSPPEGMDLRKWEY
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgtacccaagatgccaggactcgtgttcctatcgtgcacgaaccaacccgtgggcgcgc
ctgcgggctgcaaatacgcgacgtcgtggtcccgagcccacgaccccagcgaccaacaaa
atctcgggaaacacgcggcctatcgaatcgtccctggatcaaagcctcgccgacttcgcc
gccgcacccgctgccatggcggcgccgacgcccgcggagctggagcacaaggcgacggag
gccttcttcgacgacgacttcgccctcgccgccgcgctctacacgcaggccattgccgcg
ggtccccccaccgcggcgcgctacgccgaccgcgcccaggcccacgccaagatgggagat
ttcgccgcggccgccgcggacgccgcccgcgccgccgagctcgaccccgccatgccccgg
gcgcacctccgcagggcccacgcctgcgtcaagctggagcagtacgacgacgcccgggcc
gccgccgaggccggcgccgccctggcccccggcgacgcgcggttcgccaagctgatgagc
gagatcgacgccaaggcgcccaagccgatggagaccgaggcgagcgccgccgtcgccgcg
ccggcttctgcggagaagcccaagtacagacacgactactacaacagcgcggcggaggtg
gtggtgaccgtgttcgccaagggcgtggcccccgagcacgtcgcggtggatttcggcgag
cagctgctgagcgtctccgtcgaggtccccggcgaggcgccgtaccacctgcagccccgg
ctgttcggcaagatcgtccccgacaagtgccggttcgccgtcctctccaccaagatcgag
gtccgcctcgccaaggccgagccggggacgacgtggccgtcgctggagttcaccggcaag
cccaggctcgccaccgtggcgccaccacgcgggagcagctcctcctccggcggcggcggc
ggcgcccagcggccgagctacccgtcgtccaggggccgcaaggactgggacaggatcgag
gcggaggtgaagagggcggagaaggaggagaagctggacggcgatgcggctgccaacaag
ttcttccaggacatcttccgcaacgccgacgaggacatgcggcgcgccatgaccaagtcg
ttccaggagtccaacggcacggtgctgtcgaccaactggaaggacgtcggcgccaagaag
attgagcccagcccgccggaaggcatggatctgcgcaagtgggagtactga

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