Panicum virgatum (switchgrass): 120706077
Help
Entry
120706077 CDS
T07260
Name
(RefSeq) 16.9 kDa class I heat shock protein 1-like
KO
K13993
HSP20 family protein
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120706077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120706077
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP20
120706077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP20
ArsA_HSP20
DUF4488
CS
Secretin
Beta-prop_WDR35_TULP_N
DUF5065
Motif
Other DBs
NCBI-GeneID:
120706077
NCBI-ProteinID:
XP_039846582
LinkDB
All DBs
Position
5K:8197657..8198426
Genome browser
AA seq
152 aa
AA seq
DB search
MSLVRRSSVFDPFSLDLWDPFDSMLRSVDPSPGSSDSDTAAFAAARIDWKETPEAHVFKA
DLPGVKKEEVKVEVEDGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENTKVD
QVKAGLENGVLTVTVPKAEEKKPEVKAIEISG
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggtgaggcgcagcagcgtgttcgaccccttctccctcgacctctgggacccc
ttcgacagcatgctccgctccgtcgacccgtcgcccggctcctccgactccgacaccgcc
gccttcgccgccgcccgcatcgactggaaggagacgcccgaggcgcacgtgttcaaagcc
gacctccccggcgtcaagaaggaggaggtcaaggtggaggtggaggacggcaacgtgctg
gtcatcagcggccagcgcagcaaggagaaggaggacaagaacgacaagtggcaccgcgtg
gagcgcagcagcggccagttcatgaggcggttccgcctcccggagaacaccaaggtcgac
caggtgaaggctgggttggagaacggcgtgctcaccgtcaccgtgcccaaggcggaggag
aagaagcctgaggtcaaggctatcgagatctctggttaa
DBGET
integrated database retrieval system
